SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001012339
Gene Symbol: DNAJC21

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.34954619C>A COSM122654 HN_62421 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8076 tgaCCATATAaaggc UAUAUGGA m7a Created HPCB3_18008_G24734.1_34954719
hsa-miR-6083 tgaccATATAAaggc CUUAUAUC m6b Created HPCB3_18008_G24734.1_34954719
hsa-miR-8061 tgaccATCTAAaggc CUUAGAUU m6b Disrupted HPCB3_18008_G24734.1_34954719

Mutation Mutation ID Sample Name Cancer Type
chr5:g.34954605A>C COSM1204205 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-630 cgGAATACacttttt AGUAUUCU m6b Created HPCB3_18008_G24734.1_34954719
hsa-miR-561-3p cggaatAAACTTTtt CAAAGUUU m7b Disrupted HPCB3_18008_G24734.1_34954719
hsa-miR-548t-5p cggaataCACTTTTt CAAAAGUG m7b Created HPCB3_18008_G24734.1_34954719
hsa-miR-548az-5p cggaataCACTTTTt CAAAAGUG m7b Created HPCB3_18008_G24734.1_34954719
hsa-miR-223-5p cggAATACACttttt CGUGUAUU m7b Created HPCB3_18008_G24734.1_34954719

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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