SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001012320
Gene Symbol: ZNF302

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684947C>G COSM712044 TCGA-66-2759-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4666a-5p tcagCATGTAagaat AUACAUGU m6b Created HPCB3_10954_G14967.1_35175846
hsa-miR-4728-3p TCAGCATGtaagaat CAUGCUGA m8a Created HPCB3_10954_G14967.1_35175846
hsa-miR-600 tcagcaTGTAAGaat ACUUACAG m6b Created HPCB3_10954_G14967.1_35175846
hsa-miR-8061 tcagcATCTAAGaat CUUAGAUU m7a Disrupted HPCB3_10954_G14967.1_35175846

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684935C>G COSM1304421 TCGA-DK-A3IL-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 gtccCTTCTCattca AGAGAAGA m6b Disrupted HPCB3_10954_G14967.1_35175846
hsa-miR-3154 gtCCCTTCTcattca CAGAAGGG m7b (m7b->m6b) HPCB3_10954_G14967.1_35175846
hsa-miR-4475 GTCCCTTGtcattca CAAGGGAC m8a Created HPCB3_10954_G14967.1_35175846
hsa-miR-6770-5p gtcCCTTCTCAttca UGAGAAGG m8a Disrupted HPCB3_10954_G14967.1_35175846
hsa-miR-7515 gTCCCTTCTcattca AGAAGGGA m8a (m8a->m7a) HPCB3_10954_G14967.1_35175846

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684930C>G COSM712045 TCGA-66-2759-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-3p cgtgtGTGCCTTctc UAAGGCAC m7b Created HPCB3_10954_G14967.1_35175846
hsa-miR-3154 cgtgtgtCCCTTCTc CAGAAGGG m7b Disrupted HPCB3_10954_G14967.1_35175846
hsa-miR-4475 cgtgtGTCCCTTctc CAAGGGAC m7b Disrupted HPCB3_10954_G14967.1_35175846
hsa-miR-506-3p cgtgtGTGCCTTctc UAAGGCAC m7b Created HPCB3_10954_G14967.1_35175846
hsa-miR-5582-5p cgtgTGTGCCTtctc UAGGCACA m7b Created HPCB3_10954_G14967.1_35175846
hsa-miR-605-3p cgtgtgTGCCTTCTc AGAAGGCA m8a Created HPCB3_10954_G14967.1_35175846
hsa-miR-7515 cgtgtgTCCCTTCTc AGAAGGGA m8a Disrupted HPCB3_10954_G14967.1_35175846
hsa-miR-7845-5p cgtgTGTCCCTTctc AAGGGACA m8a Disrupted HPCB3_10954_G14967.1_35175846

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34683174A>G COSM3196873 TCGA-DD-A11B-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135a-5p ctAAGCCATAtgtga UAUGGCUU m8a Disrupted HPCB3_10953_G14966.1_35174079
hsa-miR-135b-5p ctAAGCCATAtgtga UAUGGCUU m8a Disrupted HPCB3_10953_G14966.1_35174079
hsa-miR-5580-3p ctaagcCATATGTGa CACAUAUG m8a Disrupted HPCB3_10953_G14966.1_35174079
hsa-miR-889-5p ctaAGCCATatgtga AAUGGCUG m6b Disrupted HPCB3_10953_G14966.1_35174079

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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