SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010987
Gene Symbol: IFIT1B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.89384219C>G COSM358433 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-664b-3p tcCAAATGAAggaag UUCAUUUG m8a Created HPTA1_1671_G2270.1_91143962
hsa-miR-579-3p tcCAAATGAAggaag UUCAUUUG m8a Created HPTA1_1671_G2270.1_91143962
hsa-miR-5696 tccAAATGAaggaag CUCAUUUA m6b Created HPTA1_1671_G2270.1_91143962
hsa-miR-502-5p tccaaatCAAGGAag AUCCUUGC m6b Disrupted HPTA1_1671_G2270.1_91143962
hsa-miR-205-5p tccaaATGAAGGAag UCCUUCAU m8a Created HPTA1_1671_G2270.1_91143962

Mutation Mutation ID Sample Name Cancer Type
chr10:g.89384212T>C COSM1603833 HCC136T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5004-3p caaatgATCCAAatc CUUGGAUU m6b Disrupted HPTA1_1671_G2270.1_91143962

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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