SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010924
Gene Symbol: FAM171A1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.15214332A>G COSM2131295 HCT15 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1205 ctctCCTGCAGcacc UCUGCAGG m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-1537-5p ctctccTACAGCacc AGCUGUAA m6b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4718 ctctccTACAGCacc AGCUGUAC m6b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4722-5p ctCTCCTGCagcacc GGCAGGAG m7b (m6b->m7b) HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4768-3p cTCTCCTGcagcacc CCAGGAGA m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-1205 ctctCCTGCAGcacc UCUGCAGG m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-1537-5p ctctccTACAGCacc AGCUGUAA m6b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4718 ctctccTACAGCacc AGCUGUAC m6b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4722-5p ctCTCCTGCagcacc GGCAGGAG m7b (m6b->m7b) HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4768-3p cTCTCCTGcagcacc CCAGGAGA m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963

Mutation Mutation ID Sample Name Cancer Type
chr10:g.15214312A>C COSM109766 35T [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4300 ggaatttAGCTCCCg UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4633-3p ggaattTAGCTCCcg AGGAGCUA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-5591-5p ggaatttAGCTCCCg UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6090 ggaatttCGCTCCCg GGGGAGCG m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-610 ggaatTTAGCTCccg UGAGCUAA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6500-5p ggaattTAGCTCCcg AGGAGCUA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6726-5p ggaatttAGCTCCCg CGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-920 ggaatttAGCTCCCg GGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4300 ggaatttAGCTCCCg UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4633-3p ggaattTAGCTCCcg AGGAGCUA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-5591-5p ggaatttAGCTCCCg UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6090 ggaatttCGCTCCCg GGGGAGCG m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-610 ggaatTTAGCTCccg UGAGCUAA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6500-5p ggaattTAGCTCCcg AGGAGCUA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6726-5p ggaatttAGCTCCCg CGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-920 ggaatttAGCTCCCg GGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963

Mutation Mutation ID Sample Name Cancer Type
chr10:g.15214310C>T COSM4013027 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4300 aatttAGCTCCCggg UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4471 aatttAGTTCCCggg UGGGAACU m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4633-3p aattTAGCTCCcggg AGGAGCUA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-5591-5p aatttAGCTCCCggg UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-610 aatTTAGCTCccggg UGAGCUAA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6500-5p aattTAGCTCCcggg AGGAGCUA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6726-5p aatttAGCTCCCGgg CGGGAGCU m8a Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-8059 aatttAGTTCCCggg GGGGAACU m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-920 aatttAGCTCCCggg GGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4300 aatttAGCTCCCggg UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4471 aatttAGTTCCCggg UGGGAACU m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4633-3p aattTAGCTCCcggg AGGAGCUA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-5591-5p aatttAGCTCCCggg UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-610 aatTTAGCTCccggg UGAGCUAA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6500-5p aattTAGCTCCcggg AGGAGCUA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6726-5p aatttAGCTCCCGgg CGGGAGCU m8a Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-8059 aatttAGTTCCCggg GGGGAACU m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-920 aatttAGCTCCCggg GGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963

Mutation Mutation ID Sample Name Cancer Type
chr10:g.15214306C>T COSM4429738 402 [upper_aerodigestive_tract][larynx][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p tagcTCCCGGGagga CCCCGGGA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-1915-3p tagctCCTGGGagga CCCCAGGG m6b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-2116-3p tagctccTGGGAGGa CCUCCCAU m7a Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4300 tAGCTCCCgggagga UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4532 tagctCCCGGGagga CCCCGGGG m6b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4633-3p TAGCTCCTgggagga AGGAGCUA m8a Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4726-3p tagctCCTGGGagga ACCCAGGU m6b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-532-3p tagctccTGGGAGGa CCUCCCAC m7a Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-5591-5p tAGCTCCCgggagga UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-665 tagCTCCTGGgagga ACCAGGAG m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6726-5p tAGCTCCCGggagga CGGGAGCU m8a (m8a->m7a) HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6840-3p tagcTCCTGGGagga GCCCAGGA m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-920 tAGCTCCCgggagga GGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-1247-3p tagcTCCCGGGagga CCCCGGGA m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-1915-3p tagctCCTGGGagga CCCCAGGG m6b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-2116-3p tagctccTGGGAGGa CCUCCCAU m7a Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4300 tAGCTCCCgggagga UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4532 tagctCCCGGGagga CCCCGGGG m6b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4633-3p TAGCTCCTgggagga AGGAGCUA m8a Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4726-3p tagctCCTGGGagga ACCCAGGU m6b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-532-3p tagctccTGGGAGGa CCUCCCAC m7a Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-5591-5p tAGCTCCCgggagga UGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-665 tagCTCCTGGgagga ACCAGGAG m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6726-5p tAGCTCCCGggagga CGGGAGCU m8a (m8a->m7a) HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6840-3p tagcTCCTGGGagga GCCCAGGA m7b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-920 tAGCTCCCgggagga GGGGAGCU m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963

Mutation Mutation ID Sample Name Cancer Type
chr10:g.15214300G>A COSM3436196 TCGA-EE-A2GT-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4268 ccggGAGGAGCtcct GGCUCCUC m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-629-3p ccGGGAGAAgctcct GUUCUCCC m7b (m6b->m7b) HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6749-3p ccGGGAGGAGctcct CUCCUCCC m8a Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6867-3p ccGGGAGAagctcct CUCUCCCU m6b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-4268 ccggGAGGAGCtcct GGCUCCUC m7b Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-629-3p ccGGGAGAAgctcct GUUCUCCC m7b (m6b->m7b) HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6749-3p ccGGGAGGAGctcct CUCCUCCC m8a Disrupted HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963
hsa-miR-6867-3p ccGGGAGAagctcct CUCUCCCU m6b Created HHKTB_3567_NM_001010924|1255|1294|31.493191669222|0.693738440861963

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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