SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010879
Gene Symbol: ZIK1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.57591223C>T COSM3540473 TCGA-EE-A2GM-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-651-3p gggaaTTCCTTTagc AAAGGAAA m7a Disrupted HPTK1_15252_G18062.1_58102574
hsa-miR-4744 gggaattTCTTTAGc UCUAAAGA m7b Created HPTK1_15252_G18062.1_58102574
hsa-miR-4509 gggaattCCTTTAGc ACUAAAGG m7b Disrupted HPTK1_15252_G18062.1_58102574
hsa-miR-186-5p gggaatTTCTTTagc CAAAGAAU m6b Created HPTK1_15252_G18062.1_58102574

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57591218G>T COSM2972771 SNU-C1 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1260a aatGTGGGAattcct AUCCCACC m6b Disrupted HPTK1_15252_G18062.1_58102574
hsa-miR-3156-3p aatGTGGGAattcct CUCCCACU m6b Disrupted HPTK1_15252_G18062.1_58102574
hsa-miR-188-3p aaTGTGGGAattcct CUCCCACA m7b (m7b->m6b) HPTK1_15252_G18062.1_58102574
hsa-miR-140-3p aaTGTGGTAattcct UACCACAG m7a (m6a->m7a) HPTK1_15252_G18062.1_58102574
hsa-miR-1260b aatGTGGGAattcct AUCCCACC m6b Disrupted HPTK1_15252_G18062.1_58102574

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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