SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001010872 |
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Gene Symbol: | FAM83B |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr6:g.54941195G>T | COSM4423626 | 2171684 | [central_nervous_system][thalamus][glioma][astrocytoma_Grade_IV] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-15a-5p | catTGCTGCTttact | UAGCAGCA | m7b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-15b-5p | catTGCTGCTttact | UAGCAGCA | m7b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-16-5p | catTGCTGCTttact | UAGCAGCA | m7b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-186-5p | cattgcTTCTTTact | CAAAGAAU | m6b | Created | HPKTA_52320_G56524.1_54805988 |
hsa-miR-195-5p | catTGCTGCTttact | UAGCAGCA | m7b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-424-5p | catTGCTGCTttact | CAGCAGCA | m7b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-4422 | cattgcTGCTTTact | AAAAGCAU | m6b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-497-5p | catTGCTGCTttact | CAGCAGCA | m7b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-6835-3p | cattgcTGCTTTact | AAAAGCAC | m6b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-6838-5p | catTGCTGCTTtact | AAGCAGCA | m8a | Disrupted | HPKTA_52320_G56524.1_54805988 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr6:g.54941187C>T | COSM3628683 | TCGA-D3-A2JD-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3688-3p | tcagTTTCCATtgct | UAUGGAAA | m7b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-4261 | tcaGTTTCCattgct | AGGAAACA | m6b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-4738-3p | tCAGTTTCcattgct | UGAAACUG | m7b | Disrupted | HPKTA_52320_G56524.1_54805988 |
hsa-miR-548a-3p | tCAGTTTTcattgct | CAAAACUG | m7b | Created | HPKTA_52320_G56524.1_54805988 |
hsa-miR-548ar-3p | tCAGTTTTcattgct | UAAAACUG | m7b | Created | HPKTA_52320_G56524.1_54805988 |
hsa-miR-548az-3p | tCAGTTTTcattgct | AAAAACUG | m7b | Created | HPKTA_52320_G56524.1_54805988 |
hsa-miR-548e-3p | tCAGTTTTcattgct | AAAAACUG | m7b | Created | HPKTA_52320_G56524.1_54805988 |
hsa-miR-548f-3p | tCAGTTTTcattgct | AAAAACUG | m7b | Created | HPKTA_52320_G56524.1_54805988 |
hsa-miR-570-3p | tcaGTTTTCattgct | CGAAAACA | m6b | Created | HPKTA_52320_G56524.1_54805988 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr6:g.54941165G>A | COSM597072 | TCGA-50-5941-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1227-3p | tccaaGTGGCACtac | CGUGCCAC | m7b | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-138-1-3p | tccAAGTAGCactac | GCUACUUC | m7a | Created | HPKTA_52319_G56523.1_54805962 |
hsa-miR-33b-3p | tccaagtGGCACTac | CAGUGCCU | m6b | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-3614-5p | tCCAAGTGGcactac | CCACUUGG | m8a | (m8a->m7a) | HPKTA_52319_G56523.1_54805962 |
hsa-miR-371a-3p | tccaagtGGCACTac | AAGUGCCG | m6b | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-371b-3p | tccaagtGGCACTac | AAGUGCCC | m6b | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-4252 | tccaAGTGGCactac | GGCCACUG | m6b | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-4473 | tccaagtAGCACTAc | CUAGUGCU | m7b | Created | HPKTA_52319_G56523.1_54805962 |
hsa-miR-5089-3p | tccaAGTAGCActac | AUGCUACU | m7b | Created | HPKTA_52319_G56523.1_54805962 |
hsa-miR-512-3p | tccaagtAGCACTac | AAGUGCUG | m6b | Created | HPKTA_52319_G56523.1_54805962 |
hsa-miR-515-3p | tccaagtGGCACTac | GAGUGCCU | m6b | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-519e-3p | tccaagtGGCACTac | AAGUGCCU | m6b | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-520f-3p | tccaagtAGCACTac | AAGUGCUU | m6b | Created | HPKTA_52319_G56523.1_54805962 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr6:g.54941151G>T | COSM597073 | TCGA-50-5049-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4753-3p | accAAGAGAAactct | UUCUCUUU | m7a | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-4768-5p | accaAGAGAAactct | AUUCUCUC | m6b | Disrupted | HPKTA_52319_G56523.1_54805962 |
hsa-miR-6809-3p | accAAGAGAAactct | CUUCUCUU | m7b | Disrupted | HPKTA_52319_G56523.1_54805962 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr6:g.54870321G>C | COSM484215 | TCGA-B0-5713-01 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-502-5p | actaCAAGGAatggt | AUCCUUGC | m6b | Disrupted | HPKTA_52318_G56521.1_54735105 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr6:g.54870314A>G | COSM1080386 | TCGA-B5-A11J-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-142-3p | gagcctCACTACAag | UGUAGUGU | m7a | Disrupted | HPKTA_52318_G56521.1_54735105 |
hsa-miR-2467-5p | GAGCCTCActacaag | UGAGGCUC | m8a | Disrupted | HPKTA_52318_G56521.1_54735105 |
hsa-miR-381-5p | gagCCTCGCTacaag | AGCGAGGU | m7a | Created | HPKTA_52318_G56521.1_54735105 |
hsa-miR-4316 | gaGCCTCACtacaag | GGUGAGGC | m7b | (m7b->m6b) | HPKTA_52318_G56521.1_54735105 |
hsa-miR-6073 | gagccTCACTACaag | GGUAGUGA | m7b | Disrupted | HPKTA_52318_G56521.1_54735105 |
hsa-miR-921 | gagcCTCACTAcaag | CUAGUGAG | m7b | Disrupted | HPKTA_52318_G56521.1_54735105 |