SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010858
Gene Symbol: RNF187

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.228493119G>C COSM3705612 HX27T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5193 ctttgtgGAGGAGGa UCCUCCUC m7b Disrupted HHHSH_3137_RNF187|NM_001010858|exon_CDS|-6.19072727755796|-0.534012756937662
hsa-miR-3653-5p ctttgtgCAGGAGGa CCUCCUGA m7a Created HHHSH_3137_RNF187|NM_001010858|exon_CDS|-6.19072727755796|-0.534012756937662
hsa-miR-4691-5p ctttgTGGAGGAgga GUCCUCCA m7b Disrupted HHHSH_3137_RNF187|NM_001010858|exon_CDS|-6.19072727755796|-0.534012756937662
hsa-miR-660-3p ctttgtgCAGGAGGa ACCUCCUG m7b Created HHHSH_3137_RNF187|NM_001010858|exon_CDS|-6.19072727755796|-0.534012756937662
hsa-miR-6792-3p ctttgTGGAGGAGga CUCCUCCA m8a Disrupted HHHSH_3137_RNF187|NM_001010858|exon_CDS|-6.19072727755796|-0.534012756937662
hsa-miR-1976 ctttgtGCAGGAGGa CCUCCUGC m8a Created HHHSH_3137_RNF187|NM_001010858|exon_CDS|-6.19072727755796|-0.534012756937662

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228493094C>T COSM400969 LUAD-5V8LT [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-578 ccgactACAAGAAGc CUUCUUGU m8a Disrupted HHHSH_3137_RNF187|NM_001010858|exon_CDS|-6.19072727755796|-0.534012756937662
hsa-miR-643 ccgacTACAAGaagc ACUUGUAU m6b Disrupted HHHSH_3137_RNF187|NM_001010858|exon_CDS|-6.19072727755796|-0.534012756937662

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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