SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001009922 |
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Gene Symbol: | RCHY1 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.75509236C>T | COSM1310254 | TCGA-DK-A1AC-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3682-3p | agATCATCAactaga | UGAUGAUA | m7a | (m7a->m6a) | HPKTA_46697_G50405.1_76434439 |
hsa-miR-569 | agatCATTAACTaga | AGUUAAUG | m8a | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-580-5p | agATCATTAactaga | UAAUGAUU | m7a | (m6a->m7a) | HPKTA_46697_G50405.1_76434439 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.75509226G>A | COSM1328403 | TCGA-61-1733-01 | [ovary][NS][carcinoma][serous_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-106a-5p | ctagatCACTTTaaa | AAAAGUGC | m6b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-106b-5p | ctagatCACTTTAaa | UAAAGUGC | m7a | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-1245a | ctaGATCACTTtaaa | AAGUGAUC | m8a | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-17-5p | ctagatCACTTTaaa | CAAAGUGC | m6b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-20a-5p | ctagatCACTTTAaa | UAAAGUGC | m7a | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-20b-5p | ctagatCACTTTaaa | CAAAGUGC | m6b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-3609 | ctagaTCACTTTaaa | CAAAGUGA | m7b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-4796-3p | ctagatCACTTTAaa | UAAAGUGG | m7a | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-518a-3p | ctagatCGCTTTaaa | GAAAGCGC | m6b | Disrupted | HPKTA_46697_G50405.1_76434439 |
hsa-miR-518b | ctagatCGCTTTaaa | CAAAGCGC | m6b | Disrupted | HPKTA_46697_G50405.1_76434439 |
hsa-miR-518c-3p | ctagatCGCTTTaaa | CAAAGCGC | m6b | Disrupted | HPKTA_46697_G50405.1_76434439 |
hsa-miR-518d-3p | ctagatCGCTTTaaa | CAAAGCGC | m6b | Disrupted | HPKTA_46697_G50405.1_76434439 |
hsa-miR-518f-3p | ctagatCGCTTTaaa | GAAAGCGC | m6b | Disrupted | HPKTA_46697_G50405.1_76434439 |
hsa-miR-519d-3p | ctagatCACTTTaaa | CAAAGUGC | m6b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-526b-3p | ctagatCACTTTaaa | GAAAGUGC | m6b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-548ah-5p | ctagaTCACTTTaaa | AAAAGUGA | m7b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-8079 | ctaGATCACTttaaa | CAGUGAUC | m7b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-93-5p | ctagatCACTTTaaa | CAAAGUGC | m6b | Created | HPKTA_46697_G50405.1_76434439 |
hsa-miR-9-3p | ctagatcGCTTTAaa | AUAAAGCU | m6b | Disrupted | HPKTA_46697_G50405.1_76434439 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.75508921T>G | COSM2831606 | COLO678 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-125b-2-3p | agACTTGTGAagaat | UCACAAGU | m8a | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-3691-3p | aGACTTGGgaagaat | ACCAAGUC | m7b | Created | HPKTA_46696_G50404.1_76434130 |
hsa-miR-412-3p | agacttGTGAAGaat | ACUUCACC | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-4457 | agaCTTGTGAagaat | UCACAAGG | m7a | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-513b-5p | agaCTTGTGAAgaat | UUCACAAG | m8a | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-6754-3p | agacttGTGAAGAat | UCUUCACC | m7a | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-6814-5p | agaCTTGGGAagaat | UCCCAAGG | m7a | Created | HPKTA_46696_G50404.1_76434130 |
hsa-miR-6837-3p | agacttGTGAAGaat | CCUUCACU | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-6875-3p | agacttgGGAAGAAt | AUUCUUCC | m7b | Created | HPKTA_46696_G50404.1_76434130 |
hsa-miR-6882-5p | aGACTTGTgaagaat | UACAAGUC | m7b | Disrupted | HPKTA_46696_G50404.1_76434130 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.75508917G>T | COSM1057541 | TCGA-B5-A0JY-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-181a-5p | ttgtgaaGAATGTag | AACAUUCA | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-181b-5p | ttgtgaaGAATGTag | AACAUUCA | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-181c-5p | ttgtgaaGAATGTag | AACAUUCA | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-181d-5p | ttgtgaaGAATGTag | AACAUUCA | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-323a-3p | ttgtgaaTAATGTag | CACAUUAC | m6b | Created | HPKTA_46696_G50404.1_76434130 |
hsa-miR-412-3p | ttGTGAAGaatgtag | ACUUCACC | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-4262 | ttgtgaaGAATGTag | GACAUUCA | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
hsa-miR-6754-3p | ttGTGAAGAatgtag | UCUUCACC | m7a | (m7a->m6a) | HPKTA_46696_G50404.1_76434130 |
hsa-miR-6837-3p | ttGTGAAGaatgtag | CCUUCACU | m6b | Disrupted | HPKTA_46696_G50404.1_76434130 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.75508908A>G | COSM1057539 | TCGA-AX-A0J0-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.75490693G>A | COSM1057535 | TCGA-AP-A056-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-20b-3p | ggCTACAGatgtcca | ACUGUAGU | m6b | Disrupted | HPKTA_46695_G50403.1_76415891 |
hsa-miR-3137 | gGCTACAGAtgtcca | UCUGUAGC | m8a | (m8a->m7a) | HPKTA_46695_G50403.1_76415891 |
hsa-miR-3674 | ggCTACAAatgtcca | AUUGUAGA | m6b | Created | HPKTA_46695_G50403.1_76415891 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.75490673T>G | COSM3993782 | TCGA-DW-7840-01 | [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4536-3p | tATGCACGctgcttt | UCGUGCAU | m7b | Created | HPKTA_46695_G50403.1_76415891 |
hsa-miR-503-5p | tatgcaCGCTGCTtt | UAGCAGCG | m7b | Created | HPKTA_46695_G50403.1_76415891 |
hsa-miR-759 | tatgCACTCTGCttt | GCAGAGUG | m8a | Disrupted | HPKTA_46695_G50403.1_76415891 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr4:g.75490669C>T | COSM84860 | Pa16C | [pancreas][NS][NS][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4422 | cactcTGCTTTagat | AAAAGCAU | m6b | Disrupted | HPKTA_46695_G50403.1_76415891 |
hsa-miR-4509 | cactctgCTTTAGat | ACUAAAGG | m6b | Disrupted | HPKTA_46695_G50403.1_76415891 |
hsa-miR-4797-5p | cACTCTGTtttagat | GACAGAGU | m7b | Created | HPKTA_46695_G50403.1_76415891 |
hsa-miR-6835-3p | cactcTGCTTTagat | AAAAGCAC | m6b | Disrupted | HPKTA_46695_G50403.1_76415891 |