SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001009894 |
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Gene Symbol: | C12orf29 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88046891A>G | COSM1364695 | LIM1215 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4289 | aagCACAATGatctc | GCAUUGUG | m7b | Disrupted | HPRO6_18896_G22060.1_88440668 |
hsa-miR-4318 | aagCACAGTGatctc | CACUGUGG | m7a | Created | HPRO6_18896_G22060.1_88440668 |
hsa-miR-5008-3p | aAGCACAGtgatctc | CCUGUGCU | m7b | Created | HPRO6_18896_G22060.1_88440668 |
hsa-miR-5694 | aagcacaATGATCTc | CAGAUCAU | m7b | Disrupted | HPRO6_18896_G22060.1_88440668 |
hsa-miR-6737-3p | aAGCACAGtgatctc | UCUGUGCU | m7b | Created | HPRO6_18896_G22060.1_88440668 |
hsa-miR-6760-3p | aagcACAGTGatctc | ACACUGUC | m6b | Created | HPRO6_18896_G22060.1_88440668 |
hsa-miR-7157-3p | aAGCACAGtgatctc | UCUGUGCU | m7b | Created | HPRO6_18896_G22060.1_88440668 |
hsa-miR-892a | aagCACAGTGatctc | CACUGUGU | m7a | Created | HPRO6_18896_G22060.1_88440668 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88046879C>A | COSM1364694 | TCGA-AZ-4616-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4275 | ctacctTAATTGaag | CCAAUUAC | m6b | Created | HPRO6_18896_G22060.1_88440668 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88046848C>A | COSM3720155 | PD7398a | [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][essential_thrombocythaemia] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-136-5p | tataccaAATGGAGc | ACUCCAUU | m7b | Created | HPRO6_18895_G22059.1_88440622 |
hsa-miR-5002-5p | tatACCAAATggagc | AAUUUGGU | m7b | Created | HPRO6_18895_G22059.1_88440622 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88046843T>C | COSM1364693 | TCGA-G4-6309-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88046842A>G | COSM1513408 | TCGA-99-8028-01 | [lung][right_upper_lobe][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-150-3p | tcttctTGTACCAca | CUGGUACA | m7b | Created | HPRO6_18895_G22059.1_88440622 |
hsa-miR-3653-3p | tCTTCTTAtaccaca | CUAAGAAG | m7b | Disrupted | HPRO6_18895_G22059.1_88440622 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88042846G>T | COSM2153570 | TCGA-12-0616 | [central_nervous_system][brain][glioma][astrocytoma_Grade_IV] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-325 | tgggctCTACTAGat | CCUAGUAG | m7b | Created | HPRO6_18894_G22058.1_88436617 |
hsa-miR-4732-5p | tggGCTCTACtagat | UGUAGAGC | m7b | Created | HPRO6_18894_G22058.1_88436617 |
hsa-miR-554 | tgggctcGACTAGat | GCUAGUCC | m6b | Disrupted | HPRO6_18894_G22058.1_88436617 |
hsa-miR-6832-5p | tgggCTCTACTagat | AGUAGAGA | m7a | Created | HPRO6_18894_G22058.1_88436617 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88042843C>A | COSM2153543 | TCGA-12-0616 | [central_nervous_system][brain][glioma][astrocytoma_Grade_IV] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4733-5p | ctTTGGGATcgacta | AAUCCCAA | m7b | (m6b->m7b) | HPRO6_18894_G22058.1_88436617 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88042834A>G | COSM4045252 | TCGA-CG-5721-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3622b-5p | cagCCATGCCTttgg | AGGCAUGG | m8a | Created | HPRO6_18894_G22058.1_88436617 |
hsa-miR-3910 | cagccATGCCTTTgg | AAAGGCAU | m8a | Created | HPRO6_18894_G22058.1_88436617 |
hsa-miR-548an | cagccaTGCCTTTgg | AAAAGGCA | m7b | Created | HPRO6_18894_G22058.1_88436617 |
hsa-miR-548m | cagccaTACCTTTGg | CAAAGGUA | m8a | Disrupted | HPRO6_18894_G22058.1_88436617 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88040213A>G | COSM944209 | TCGA-B5-A11U-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-106b-3p | aCAGTGCGattccaa | CCGCACUG | m7b | Created | HPRO6_18893_G22057.1_88433987 |
hsa-miR-219b-3p | acagtGCAATTCcaa | AGAAUUGC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-25-3p | acaGTGCAATtccaa | CAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-32-5p | acaGTGCAATtccaa | UAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-363-3p | acaGTGCAATTccaa | AAUUGCAC | m8a | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-367-3p | acaGTGCAATTccaa | AAUUGCAC | m8a | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-92a-3p | acaGTGCAATtccaa | UAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-92b-3p | acaGTGCAATtccaa | UAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.88040209G>A | COSM1739948 | MAVER-1 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][mantle_cell_lymphoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-25-3p | atatacaGTGCAATt | CAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-32-5p | atatacaGTGCAATt | UAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-33a-5p | atataCAATGCAatt | GUGCAUUG | m7b | Created | HPRO6_18893_G22057.1_88433987 |
hsa-miR-33b-5p | atataCAATGCAatt | GUGCAUUG | m7b | Created | HPRO6_18893_G22057.1_88433987 |
hsa-miR-363-3p | atatacaGTGCAATt | AAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-367-3p | atatacaGTGCAATt | AAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-4289 | atatACAATGCaatt | GCAUUGUG | m7a | Created | HPRO6_18893_G22057.1_88433987 |
hsa-miR-92a-3p | atatacaGTGCAATt | UAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |
hsa-miR-92b-3p | atatacaGTGCAATt | UAUUGCAC | m7b | Disrupted | HPRO6_18893_G22057.1_88433987 |