SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008844
Gene Symbol: DSP
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.7583236G>T COSM1621932 HCC100T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p aacctTGTACAaact CUGUACAG m6b Created HPTA1_9407_G13537.1_7583469
hsa-let-7c-3p aaccTTGTACAaact CUGUACAA m7b Created HPTA1_9407_G13537.1_7583469
hsa-let-7g-3p aacctTGTACAaact CUGUACAG m6b Created HPTA1_9407_G13537.1_7583469
hsa-miR-2355-3p aaccttGGACAAact AUUGUCCU m6b Disrupted HPTA1_9407_G13537.1_7583469
hsa-miR-3912-5p aacctTGGACAaact AUGUCCAU m6b Disrupted HPTA1_9407_G13537.1_7583469
hsa-miR-4646-3p aaccttGGACAAact AUUGUCCC m6b Disrupted HPTA1_9407_G13537.1_7583469
hsa-miR-4761-5p aACCTTGTacaaact ACAAGGUG m7a Created HPTA1_9407_G13537.1_7583469
hsa-miR-493-5p aacctTGTACAAact UUGUACAU m7a Created HPTA1_9407_G13537.1_7583469
hsa-miR-624-3p aACCTTGTacaaact CACAAGGU m7b Created HPTA1_9407_G13537.1_7583469

Mutation Mutation ID Sample Name Cancer Type
chr6:g.7583232C>T COSM3629803 TCGA-BF-A1Q0-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p aaACAACTTtggaca GAAGUUGU m7b (m6b->m7b) HPTA1_9407_G13537.1_7583469

Mutation Mutation ID Sample Name Cancer Type
chr6:g.7583221G>T COSM1445908 TCGA-DM-A0X9-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-383-5p gCTGATCTacaaaac AGAUCAGA m7a Created HPTA1_9407_G13537.1_7583469
hsa-miR-3674 gctgaTCTACAAaac AUUGUAGA m7b Created HPTA1_9407_G13537.1_7583469
hsa-miR-376a-2-5p gctgATCTACaaaac GGUAGAUU m6b Created HPTA1_9407_G13537.1_7583469
hsa-miR-3935 gctgATCTACAaaac UGUAGAUA m7a Created HPTA1_9407_G13537.1_7583469
hsa-miR-5694 gcTGATCTacaaaac CAGAUCAU m6b Created HPTA1_9407_G13537.1_7583469

Mutation Mutation ID Sample Name Cancer Type
chr6:g.7578483G>A COSM3629751 TCGA-EE-A29C-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4523 catgCTCGGTacatt GACCGAGA m6b Disrupted HPTA1_9406_G13536.1_7578719
hsa-miR-6751-3p catGCTCAGTacatt ACUGAGCC m7a Created HPTA1_9406_G13536.1_7578719

Mutation Mutation ID Sample Name Cancer Type
chr6:g.7578481T>A COSM3394318 8064637 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1973 ttcaTGCACGGTaca ACCGUGCA m8a Created HPTA1_9406_G13536.1_7578719
hsa-miR-4523 ttcatgCTCGGTaca GACCGAGA m6b Disrupted HPTA1_9406_G13536.1_7578719
hsa-miR-4536-3p ttcATGCACGgtaca UCGUGCAU m7b Created HPTA1_9406_G13536.1_7578719

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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