SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001008727
Gene Symbol: ZNF121

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr19:g.9566179T>G COSM3938426 ESCC-246T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-5p gAAGCCCTatgaatg AGGGCUUA m7a Disrupted HPSEF_11562_G13850.1_9676851
hsa-miR-3158-3p gAAGCCCTatgaatg AAGGGCUU m7b Disrupted HPSEF_11562_G13850.1_9676851
hsa-miR-376a-3p gaagccCTATGAatg AUCAUAGA m6b Disrupted HPSEF_11562_G13850.1_9676851
hsa-miR-376b-3p gaagccCTATGAatg AUCAUAGA m6b Disrupted HPSEF_11562_G13850.1_9676851
hsa-miR-3944-3p gaAGCCCGAtgaatg UUCGGGCU m7b (m6b->m7b) HPSEF_11562_G13850.1_9676851
hsa-miR-4446-3p gaAGCCCTatgaatg CAGGGCUG m6b Disrupted HPSEF_11562_G13850.1_9676851
hsa-miR-5088-5p gaAGCCCTatgaatg CAGGGCUC m6b Disrupted HPSEF_11562_G13850.1_9676851

Mutation Mutation ID Sample Name Cancer Type
chr19:g.9566178A>G COSM475635 TCGA-B0-4712-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376a-3p aagccCTATGAatgt AUCAUAGA m6b Disrupted HPSEF_11562_G13850.1_9676851
hsa-miR-376b-3p aagccCTATGAatgt AUCAUAGA m6b Disrupted HPSEF_11562_G13850.1_9676851
hsa-miR-513a-5p aagcCCTGTGAAtgt UUCACAGG m8a Created HPSEF_11562_G13850.1_9676851

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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