SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008661
Gene Symbol: CCBL2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.88964852G>A COSM3361036 TCGA-BP-4762-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273e catTCAAGCAttaat UUGCUUGA m7b Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-155-5p cattcaAGCATTAAt UUAAUGCU m8a Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-33a-3p cattcAAACATTaat CAAUGUUU m7b Created HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-409-3p cattcaAACATTaat GAAUGUUG m6b Created HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-4307 cattcAAACATTaat AAUGUUUU m7a Created HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-155-5p cattcaAGCATTAAt UUAAUGCU m8a Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-4307 cattcAAACATTaat AAUGUUUU m7a Created HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-409-3p cattcaAACATTaat GAAUGUUG m6b Created HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-33a-3p cattcAAACATTaat CAAUGUUU m7b Created HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-1273e catTCAAGCAttaat UUGCUUGA m7b Disrupted HHRBC_536_BC3-2of3-SCL_1407

Mutation Mutation ID Sample Name Cancer Type
chr1:g.88964838G>C COSM426788 TCGA-A8-A08L-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7113-3p ttgatgAGGGAGatg CCUCCCUG m6b Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-6891-3p ttGATGAGGGagatg CCCUCAUC m8a Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-6867-3p ttgatgAGGGAGAtg CUCUCCCU m7b Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-6867-3p ttgatgAGGGAGAtg CUCUCCCU m7b Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-6072 ttGATGAGGgagatg UCCUCAUC m7b (m7b->m6b) HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-6891-3p ttGATGAGGGagatg CCCUCAUC m8a Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-4469 ttgatGAGGGAGatg GCUCCCUC m7b Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-3605-3p ttgatgACGGAGatg CCUCCGUG m6b Created HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-6072 ttGATGAGGgagatg UCCUCAUC m7b (m7b->m6b) HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-4469 ttgatGAGGGAGatg GCUCCCUC m7b Disrupted HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-3605-3p ttgatgACGGAGatg CCUCCGUG m6b Created HHRBC_536_BC3-2of3-SCL_1407
hsa-miR-7113-3p ttgatgAGGGAGatg CCUCCCUG m6b Disrupted HHRBC_536_BC3-2of3-SCL_1407

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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