SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008541
Gene Symbol: MXI1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.110284943G>A COSM914724 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4655-3p gagtgACGAGGGTta ACCCUCGU m8a Disrupted HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-668-3p GAGTGACAagggtta UGUCACUC m8a Created HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-6780b-3p gagtgACAAGGGtta UCCCUUGU m7b Created HHRBC_1953_BC3-2of3-SCL_478

Mutation Mutation ID Sample Name Cancer Type
chr10:g.110284930T>C COSM914723 TCGA-BS-A0TA-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323b-3p tgccgaGTATTGGGa CCCAAUAC m8a Disrupted HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-423-3p tgCCGAGCattggga AGCUCGGU m6b Created HHRBC_1953_BC3-2of3-SCL_478

Mutation Mutation ID Sample Name Cancer Type
chr10:g.110284927G>A COSM3434090 TCGA-D3-A5GU-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1307-3p gcctGCCGAGTattg ACUCGGCG m7a Disrupted HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-4638-5p gcctGCCGAGTattg ACUCGGCU m7a Disrupted HHRBC_1953_BC3-2of3-SCL_478

Mutation Mutation ID Sample Name Cancer Type
chr10:g.110284911A>G COSM201273 TCGA-A6-2672-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7108-5p attgatGGCCACAgc GUGUGGCC m7b Created HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-3187-3p attgATGGCCAcagc UUGGCCAU m7b Created HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-4529-5p attGATGGCCacagc AGGCCAUC m7b Created HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-663b attgatGGCCACagc GGUGGCCC m6b Created HHRBC_1953_BC3-2of3-SCL_478

Mutation Mutation ID Sample Name Cancer Type
chr10:g.110284905T>A COSM295231 TCGA-AA-3842-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4289 agtgACAATGatgac GCAUUGUG m6b Created HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-513b-3p agTGACATTgatgac AAAUGUCA m7b (m7b->m6b) HHRBC_1953_BC3-2of3-SCL_478

Mutation Mutation ID Sample Name Cancer Type
chr10:g.110284880A>G COSM4185708 BK0008 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-600 ggacaaTGTAAGTac ACUUACAG m7a Created HHRBC_1953_BC3-2of3-SCL_478
hsa-miR-5701 gGACAATAtaagtac UUAUUGUC m7b Disrupted HHRBC_1953_BC3-2of3-SCL_478

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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