SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007527
Gene Symbol: LMBRD2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.36105179G>T COSM592348 TCGA-73-4670-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4687-5p tataccAGGGCTaat CAGCCCUC m6b Disrupted HPTA1_9136_G13166.1_36105280
hsa-miR-4774-5p tATACCAGggctaat UCUGGUAU m7b Disrupted HPTA1_9136_G13166.1_36105280
hsa-miR-6779-3p tatacCAGGGCTaat AAGCCCUG m7b Disrupted HPTA1_9136_G13166.1_36105280
hsa-miR-129-2-3p tataccAGGGCTaat AAGCCCUU m6b Disrupted HPTA1_9136_G13166.1_36105280
hsa-miR-129-1-3p tataccAGGGCTaat AAGCCCUU m6b Disrupted HPTA1_9136_G13166.1_36105280

Mutation Mutation ID Sample Name Cancer Type
chr5:g.36105170A>G COSM4402478 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1266-3p gctaatAACAGGact CCCUGUUC m6b Disrupted HPTA1_9136_G13166.1_36105280
hsa-miR-370-3p gctaatAGCAGGact GCCUGCUG m6b Created HPTA1_9136_G13166.1_36105280
hsa-miR-6893-3p gctaatAGCAGGact CCCUGCUG m6b Created HPTA1_9136_G13166.1_36105280

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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