SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007253
Gene Symbol: ERV3-1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.64992399C>G COSM4831012 TCGA-EA-A1QS-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4492 agatCAGCCCatatg GGGGCUGG m6b Disrupted HPSLC_18418_G21920.1_64452768
hsa-miR-4656 agaTCAGCCCAtatg UGGGCUGA m8a Disrupted HPSLC_18418_G21920.1_64452768
hsa-miR-4675 agatCAGCCCatatg GGGGCUGU m6b Disrupted HPSLC_18418_G21920.1_64452768
hsa-miR-4741 agatCAGCCCatatg CGGGCUGU m6b Disrupted HPSLC_18418_G21920.1_64452768
hsa-miR-5001-5p agatCAGCCCatatg AGGGCUGG m6b Disrupted HPSLC_18418_G21920.1_64452768
hsa-miR-6735-3p agatCAGGCCatatg AGGCCUGU m6b Created HPSLC_18418_G21920.1_64452768
hsa-miR-762 agatCAGCCCatatg GGGGCUGG m6b Disrupted HPSLC_18418_G21920.1_64452768
hsa-miR-1587 agatCAGCCCAtatg UUGGGCUG m7b Disrupted HPSLC_18418_G21920.1_64452768
hsa-miR-3620-5p agatCAGCCCAtatg GUGGGCUG m7b Disrupted HPSLC_18418_G21920.1_64452768

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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