SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007237
Gene Symbol: IGSF3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.116577517A>G COSM894406 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-298 ctCTTCTGCTtcgtc AGCAGAAG m8a Created HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-298 ctCTTCTGCTtcgtc AGCAGAAG m8a Created HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116577493CCC>TTC COSM4566308 CSCC-29-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2110 accctTTCCCCAtcttt UUGGGGAA m7b Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-3148 acccTTTTTCCAtcttt UGGAAAAA m8a Created HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-3153 accCTTTCCCCatcttt GGGGAAAG m8a Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-3688-3p acccttTTTCCATcttt UAUGGAAA m7b Created HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-4271 accctTTCCCCatcttt GGGGGAAG m6b Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-6733-5p accCTTTCCCcatcttt UGGGAAAG m7b Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-6739-5p accCTTTCCCcatcttt UGGGAAAG m7b Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-2110 accctTTCCCCAtcttt UUGGGGAA m7b Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-3148 acccTTTTTCCAtcttt UGGAAAAA m8a Created HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-3153 accCTTTCCCCatcttt GGGGAAAG m8a Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-3688-3p acccttTTTCCATcttt UAUGGAAA m7b Created HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-4271 accctTTCCCCatcttt GGGGGAAG m6b Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-6733-5p accCTTTCCCcatcttt UGGGAAAG m7b Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949
hsa-miR-6739-5p accCTTTCCCcatcttt UGGGAAAG m7b Disrupted HHKTB_2932_NM_001542|4145|4184|35.2226485774194|0.16490433418949

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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