SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007189
Gene Symbol: IGIP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.140128647G>A COSN7877355 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8086 aACTAGCAaggtctg UGCUAGUC m7a Created HHRBC_10532_BC3-2of3-SCL_2558
hsa-miR-6790-3p aactagCGAGGTCtg CGACCUCG m7b Disrupted HHRBC_10532_BC3-2of3-SCL_2558
hsa-miR-449c-3p aACTAGCAAggtctg UUGCUAGU m8a (m7a->m8a) HHRBC_10532_BC3-2of3-SCL_2558
hsa-miR-3200-3p aactaGCAAGGTctg CACCUUGC m7b Created HHRBC_10532_BC3-2of3-SCL_2558

Mutation Mutation ID Sample Name Cancer Type
chr5:g.140128615G>A COSM420395 TCGA-DK-A1A7-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser