SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007101
Gene Symbol: ZNF484

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.92848343T>C COSM4743980 T3064 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6069 caCTAGCCaatgaca GGGCUAGG m6b Created HPCB1_42209_G53940.1_95610611
hsa-miR-616-3p cactagcCAATGACa AGUCAUUG m7b Created HPCB1_42209_G53940.1_95610611

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92848325A>C COSM1111188 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4272 tctTTGAATataagg CAUUCAAC m6b Disrupted HPCB1_42209_G53940.1_95610611
hsa-miR-6074 tcttTGAATATaagg GAUAUUCA m7b Disrupted HPCB1_42209_G53940.1_95610611

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92847024C>A COSM1625244 HCC60 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245b-5p ggtAAGGCCTtcttc UAGGCCUU m7b Disrupted HPCB1_42208_G53939.1_95609293
hsa-miR-3142 ggtAAGGCCTTcttc AAGGCCUU m8a Disrupted HPCB1_42208_G53939.1_95609293
hsa-miR-4493 ggtaaGGCCTTCTtc AGAAGGCC m8a Disrupted HPCB1_42208_G53939.1_95609293

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92847007CCC>TTC COSM4565152 CSCC-47-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3646 cacaaatTTCATTTTat AAAAUGAA m8a Created HPCB1_42208_G53939.1_95609293
hsa-miR-5089-5p cacaAATCCCAttttat GUGGGAUU m7b Disrupted HPCB1_42208_G53939.1_95609293

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92846834C>G COSM456250 TCGA-BH-A0B5-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-5p caaatcTGTTTACAc UGUAAACA m8a Created HPCB1_42207_G53938.1_95609107
hsa-miR-30b-5p caaatcTGTTTACAc UGUAAACA m8a Created HPCB1_42207_G53938.1_95609107
hsa-miR-30c-5p caaatcTGTTTACAc UGUAAACA m8a Created HPCB1_42207_G53938.1_95609107
hsa-miR-30d-5p caaatcTGTTTACAc UGUAAACA m8a Created HPCB1_42207_G53938.1_95609107
hsa-miR-30e-5p caaatcTGTTTACAc UGUAAACA m8a Created HPCB1_42207_G53938.1_95609107
hsa-miR-4311 caaaTCTCTTTacac GAAAGAGA m7b Disrupted HPCB1_42207_G53938.1_95609107
hsa-miR-583 caaatCTCTTTacac CAAAGAGG m6b Disrupted HPCB1_42207_G53938.1_95609107

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92846829C>T COSM2731954 LS411 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-340-5p ctCTTTATAcaccag UUAUAAAG m7b (m6b->m7b) HPCB1_42207_G53938.1_95609107
hsa-miR-3650 ctctttACACACCag AGGUGUGU m7b Disrupted HPCB1_42207_G53938.1_95609107
hsa-miR-5590-3p ctCTTTATacaccag AAUAAAGU m6b Created HPCB1_42207_G53938.1_95609107
hsa-miR-568 ctctTTATACAccag AUGUAUAA m7b Created HPCB1_42207_G53938.1_95609107

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92846484G>T COSM1674618 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p catcatcTAATTCAc GUGAAUUA m7b Created HPCB1_42206_G53937.1_95608776
hsa-miR-4452 catcatcGAATTCAc UUGAAUUC m7b Disrupted HPCB1_42206_G53937.1_95608776

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92846484G>A COSM4743978 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3682-3p cATCATCAaattcac UGAUGAUA m7a Created HPCB1_42206_G53937.1_95608776
hsa-miR-4452 catcatcGAATTCAc UUGAAUUC m7b Disrupted HPCB1_42206_G53937.1_95608776

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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