SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001007026 |
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Gene Symbol: | ATN1 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6940983C>T | COSM3968416 | TCGA-HT-7854-01 | [central_nervous_system][brain][glioma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1255a | ttcCTCATCCTctgc | AGGAUGAG | m8a | Created | HPRO6_17349_G20292.1_7050162 |
hsa-miR-1255b-5p | ttcCTCATCCtctgc | CGGAUGAG | m7b | Created | HPRO6_17349_G20292.1_7050162 |
hsa-miR-3605-5p | ttcctCATCCTCtgc | UGAGGAUG | m7b | Created | HPRO6_17349_G20292.1_7050162 |
hsa-miR-4710 | ttCCTCACCCtctgc | GGGUGAGG | m8a | Disrupted | HPRO6_17349_G20292.1_7050162 |
hsa-miR-6804-5p | ttcctCACCCTCtgc | UGAGGGUG | m7b | Disrupted | HPRO6_17349_G20292.1_7050162 |
hsa-miR-6847-5p | ttcctcaTCCTCTGc | ACAGAGGA | m7b | Created | HPRO6_17349_G20292.1_7050162 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6940951G>A | COSM4664124 | T578 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1207-3p | ctacCCAGCTGgaac | UCAGCUGG | m7b | Disrupted | HPRO6_17348_G20291.1_7050096 |
hsa-miR-145-5p | ctacccAACTGGAac | GUCCAGUU | m7b | Created | HPRO6_17348_G20291.1_7050096 |
hsa-miR-4259 | ctaCCCAACTGgaac | CAGUUGGG | m8a | Created | HPRO6_17348_G20291.1_7050096 |
hsa-miR-4267 | ctacccAGCTGGAac | UCCAGCUC | m7a | Disrupted | HPRO6_17348_G20291.1_7050096 |
hsa-miR-5195-3p | ctacccAACTGGAac | AUCCAGUU | m7b | Created | HPRO6_17348_G20291.1_7050096 |
hsa-miR-5589-5p | ctACCCAGCtggaac | GGCUGGGU | m7b | (m7b->m6b) | HPRO6_17348_G20291.1_7050096 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6940941C>T | COSM695263 | TCGA-60-2709-01 | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4713-3p | cccGGATCCCctacc | UGGGAUCC | m7b | Disrupted | HPRO6_17348_G20291.1_7050096 |
hsa-miR-5584-5p | cccggaTTCCCTacc | CAGGGAAA | m6b | Created | HPRO6_17348_G20291.1_7050096 |
hsa-miR-6750-5p | cccggaTTCCCTacc | CAGGGAAC | m6b | Created | HPRO6_17348_G20291.1_7050096 |
hsa-miR-6822-5p | cccggaTTCCCTacc | CAGGGAAC | m6b | Created | HPRO6_17348_G20291.1_7050096 |
hsa-miR-6824-5p | cccggaTCCCCTACc | GUAGGGGA | m8a | Disrupted | HPRO6_17348_G20291.1_7050096 |
hsa-miR-9500 | cccggaTTCCCTacc | AAGGGAAG | m6b | Created | HPRO6_17348_G20291.1_7050096 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6940936C>A | COSM943090 | TCGA-D1-A163-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4490 | ccTTACCAGgatccc | UCUGGUAA | m7b | (m6b->m7b) | HPRO6_17348_G20291.1_7050096 |
hsa-miR-555 | cCTTACCCggatccc | AGGGUAAG | m7b | Disrupted | HPRO6_17348_G20291.1_7050096 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6940925C>T | COSM2100264 | HT115 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4725-5p | tCAGGGTCTcacctt | AGACCCUG | m8a | (m8a->m7a) | HPRO6_17348_G20291.1_7050096 |
hsa-miR-504-5p | tCAGGGTCTcacctt | AGACCCUG | m8a | (m8a->m7a) | HPRO6_17348_G20291.1_7050096 |
hsa-miR-6732-3p | tCAGGGTTtcacctt | UAACCCUG | m7b | Created | HPRO6_17348_G20291.1_7050096 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6937112C>T | COSM127382 | HN_62298 | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3978 | ccCTTTCCACggtca | GUGGAAAG | m8a | Disrupted | HPRO6_17347_G20290.1_7046261 |
hsa-miR-5681a | CCCTTTCTacggtca | AGAAAGGG | m8a | Created | HPRO6_17347_G20290.1_7046261 |
hsa-miR-6730-5p | cCCTTTCTacggtca | AGAAAGGU | m7a | Created | HPRO6_17347_G20290.1_7046261 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6937099C>T | COSM243105 | PR-00-1165 | [prostate][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4662a-5p | acctctTTGGCTAcc | UUAGCCAA | m7b | Created | HPRO6_17347_G20290.1_7046261 |
hsa-miR-4671-5p | accTCTTCGGctacc | ACCGAAGA | m7b | Disrupted | HPRO6_17347_G20290.1_7046261 |
hsa-miR-583 | aCCTCTTTGgctacc | CAAAGAGG | m8a | (m7a->m8a) | HPRO6_17347_G20290.1_7046261 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6937091C>A | COSM4147430 | PTC-7C | [thyroid][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-377-5p | cggtcaCAACCTCTt | AGAGGUUG | m8a | Created | HPRO6_17347_G20290.1_7046261 |
hsa-miR-6086 | cggtcaCAACCTCtt | GGAGGUUG | m7b | Created | HPRO6_17347_G20290.1_7046261 |
hsa-miR-6134 | cggtcaCCACCTCtt | UGAGGUGG | m7b | Disrupted | HPRO6_17347_G20290.1_7046261 |
hsa-miR-6808-3p | cGGTCACAacctctt | GUGUGACC | m7b | Created | HPRO6_17347_G20290.1_7046261 |
hsa-miR-758-3p | cgGTCACAAcctctt | UUUGUGAC | m7b | (m6b->m7b) | HPRO6_17347_G20290.1_7046261 |
hsa-miR-7973 | cGGTCACAacctctt | UGUGACCC | m7a | Created | HPRO6_17347_G20290.1_7046261 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6936716C>A | COSM4995175 | NPC18F | [upper_aerodigestive_tract][pharynx][carcinoma][nasopharyngeal_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-133a-5p | atcaccACCAGCaac | AGCUGGUA | m6b | Disrupted | HPRO6_17346_G20289.1_7045866 |
hsa-miR-138-5p | atcacCACCAGCaac | AGCUGGUG | m7b | Disrupted | HPRO6_17346_G20289.1_7045866 |
hsa-miR-323a-5p | atcACCACCagcaac | AGGUGGUC | m6b | Disrupted | HPRO6_17346_G20289.1_7045866 |
hsa-miR-4299 | atcacCACCAGCaac | GCUGGUGA | m7a | Disrupted | HPRO6_17346_G20289.1_7045866 |
hsa-miR-4456 | atcaCCACCAGcaac | CCUGGUGG | m7b | Disrupted | HPRO6_17346_G20289.1_7045866 |
hsa-miR-548q | atcacCACCAGCaac | GCUGGUGC | m7a | Disrupted | HPRO6_17346_G20289.1_7045866 |
hsa-miR-6131 | atcaccACCAGCaac | GGCUGGUC | m6b | Disrupted | HPRO6_17346_G20289.1_7045866 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6936697C>T | COSM4990299 | S09-31237-TP | [skin][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2053 | ccagtcTTAACACat | GUGUUAAU | m7a | Created | HPRO6_17346_G20289.1_7045866 |
hsa-miR-208a-3p | ccaGTCTTAacacat | AUAAGACG | m6b | Created | HPRO6_17346_G20289.1_7045866 |
hsa-miR-208b-3p | ccaGTCTTAacacat | AUAAGACG | m6b | Created | HPRO6_17346_G20289.1_7045866 |
hsa-miR-3672 | ccAGTCTCAacacat | AUGAGACU | m7b | (m7b->m6b) | HPRO6_17346_G20289.1_7045866 |
hsa-miR-4432 | ccAGTCTTaacacat | AAAGACUC | m6b | Created | HPRO6_17346_G20289.1_7045866 |
hsa-miR-499a-5p | ccAGTCTTAAcacat | UUAAGACU | m8a | Created | HPRO6_17346_G20289.1_7045866 |
hsa-miR-653-5p | ccagtcTCAACACat | GUGUUGAA | m7a | Disrupted | HPRO6_17346_G20289.1_7045866 |
hsa-miR-6864-3p | ccAGTCTCAacacat | GUGAGACU | m7b | (m7b->m6b) | HPRO6_17346_G20289.1_7045866 |
hsa-miR-8087 | ccAGTCTTaacacat | GAAGACUU | m6b | Created | HPRO6_17346_G20289.1_7045866 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6935856C>T | COSM1705007 | YURIF | [NS][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-490-5p | tcatgctTCCATGGa | CCAUGGAU | m7a | Created | HPRO6_17345_G20287.1_7044998 |
hsa-miR-6079 | tcatGCTTCCAtgga | UUGGAAGC | m7b | Created | HPRO6_17345_G20287.1_7044998 |
hsa-miR-6090 | tcatGCTCCCatgga | GGGGAGCG | m6b | Disrupted | HPRO6_17345_G20287.1_7044998 |
hsa-miR-671-5p | tcatGCTTCCatgga | AGGAAGCC | m6b | Created | HPRO6_17345_G20287.1_7044998 |
hsa-miR-6726-5p | tcatGCTCCCatgga | CGGGAGCU | m6b | Disrupted | HPRO6_17345_G20287.1_7044998 |
hsa-miR-6828-5p | tcaTGCTTCCatgga | AGGAAGCA | m7b | Created | HPRO6_17345_G20287.1_7044998 |
hsa-miR-6871-5p | tcatgCTCCCATGga | CAUGGGAG | m8a | Disrupted | HPRO6_17345_G20287.1_7044998 |
hsa-miR-920 | tcatGCTCCCatgga | GGGGAGCU | m6b | Disrupted | HPRO6_17345_G20287.1_7044998 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6935845G>A | COSM1476882 | TCGA-BH-A1F6-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-144-5p | cccactgGATATCat | GGAUAUCA | m6b | Disrupted | HPRO6_17345_G20287.1_7044998 |
hsa-miR-3145-3p | cccactgAATATCat | AGAUAUUU | m6b | Created | HPRO6_17345_G20287.1_7044998 |
hsa-miR-4276 | ccCACTGAatatcat | CUCAGUGA | m6b | Created | HPRO6_17345_G20287.1_7044998 |
hsa-miR-5195-3p | cccACTGGATatcat | AUCCAGUU | m7a | Disrupted | HPRO6_17345_G20287.1_7044998 |
hsa-miR-6074 | cccacTGAATATCat | GAUAUUCA | m8a | Created | HPRO6_17345_G20287.1_7044998 |