Mutation
|
Mutation ID
|
Sample Name
|
Cancer Type
|
chr10:g.129877791C>T
|
COSM3435714
|
TCGA-FS-A4F0-06
|
[skin][NS][malignant_melanoma][NS]
|
miRNA Targets Table
|
miR ID |
miRSite |
miRSeed |
SeedClass |
FuncClass |
Cluster ID |
hsa-miR-296-3p |
aggCAACCCTCgaga |
GAGGGUUG |
m8a |
Disrupted |
HHHSE_5298_EBF3|NM_001005463|exon_CDS|-5.180237616059|-0.394787351221127 |
hsa-miR-4423-5p |
AGGCAACTctcgaga |
AGUUGCCU |
m8a |
Created |
HHHSE_5298_EBF3|NM_001005463|exon_CDS|-5.180237616059|-0.394787351221127 |
hsa-miR-296-3p |
aggCAACCCTCgaga |
GAGGGUUG |
m8a |
Disrupted |
HHHSE_5299_EBF3|NM_001005463|exon_CDS|-4.70205652831726|0.561574824262361 |
hsa-miR-4423-5p |
AGGCAACTctcgaga |
AGUUGCCU |
m8a |
Created |
HHHSE_5299_EBF3|NM_001005463|exon_CDS|-4.70205652831726|0.561574824262361 |
hsa-miR-296-3p |
aggCAACCCTCgaga |
GAGGGUUG |
m8a |
Disrupted |
HHHSE_5298_EBF3|NM_001005463|exon_CDS|-5.180237616059|-0.394787351221127 |
hsa-miR-4423-5p |
AGGCAACTctcgaga |
AGUUGCCU |
m8a |
Created |
HHHSE_5298_EBF3|NM_001005463|exon_CDS|-5.180237616059|-0.394787351221127 |
hsa-miR-296-3p |
aggCAACCCTCgaga |
GAGGGUUG |
m8a |
Disrupted |
HHHSE_5299_EBF3|NM_001005463|exon_CDS|-4.70205652831726|0.561574824262361 |
hsa-miR-4423-5p |
AGGCAACTctcgaga |
AGUUGCCU |
m8a |
Created |
HHHSE_5299_EBF3|NM_001005463|exon_CDS|-4.70205652831726|0.561574824262361 |
Mutation
|
Mutation ID
|
Sample Name
|
Cancer Type
|
chr10:g.129877786A>G
|
COSM3396992
|
TCGA-14-4157-01
|
[central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
|
miRNA Targets Table
|
miR ID |
miRSite |
miRSeed |
SeedClass |
FuncClass |
Cluster ID |
hsa-miR-4740-3p |
accCTCGGGatatgc |
GCCCGAGA |
m6b |
Created |
HHHSE_5298_EBF3|NM_001005463|exon_CDS|-5.180237616059|-0.394787351221127 |
hsa-miR-516a-5p |
accCTCGAGAtatgc |
UUCUCGAG |
m7b |
Disrupted |
HHHSE_5298_EBF3|NM_001005463|exon_CDS|-5.180237616059|-0.394787351221127 |
hsa-miR-4740-3p |
accCTCGGGatatgc |
GCCCGAGA |
m6b |
Created |
HHHSE_5299_EBF3|NM_001005463|exon_CDS|-4.70205652831726|0.561574824262361 |
hsa-miR-516a-5p |
accCTCGAGAtatgc |
UUCUCGAG |
m7b |
Disrupted |
HHHSE_5299_EBF3|NM_001005463|exon_CDS|-4.70205652831726|0.561574824262361 |
hsa-miR-4740-3p |
accCTCGGGatatgc |
GCCCGAGA |
m6b |
Created |
HHHSE_5298_EBF3|NM_001005463|exon_CDS|-5.180237616059|-0.394787351221127 |
hsa-miR-516a-5p |
accCTCGAGAtatgc |
UUCUCGAG |
m7b |
Disrupted |
HHHSE_5298_EBF3|NM_001005463|exon_CDS|-5.180237616059|-0.394787351221127 |
hsa-miR-4740-3p |
accCTCGGGatatgc |
GCCCGAGA |
m6b |
Created |
HHHSE_5299_EBF3|NM_001005463|exon_CDS|-4.70205652831726|0.561574824262361 |
hsa-miR-516a-5p |
accCTCGAGAtatgc |
UUCUCGAG |
m7b |
Disrupted |
HHHSE_5299_EBF3|NM_001005463|exon_CDS|-4.70205652831726|0.561574824262361 |
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.