SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001005167
Gene Symbol: OR52E6
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.5841127A>G COSM1354939 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1179 aagagaaGAATGCTg AAGCAUUC m7b Created HPSEF_3642_G4365.1_5862367
hsa-miR-153-5p aagagAAAAATGctg UCAUUUUU m7b Disrupted HPSEF_3642_G4365.1_5862367
hsa-miR-4659a-3p aagAGAAGAAtgctg UUUCUUCU m7b Created HPSEF_3642_G4365.1_5862367
hsa-miR-4659b-3p aagAGAAGAAtgctg UUUCUUCU m7b Created HPSEF_3642_G4365.1_5862367
hsa-miR-6809-3p AAGAGAAGaatgctg CUUCUCUU m8a Created HPSEF_3642_G4365.1_5862367
hsa-miR-942-5p aAGAGAAGAatgctg UCUUCUCU m8a (m7a->m8a) HPSEF_3642_G4365.1_5862367

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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