SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003800
Gene Symbol: BICD2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.92713299C>G COSN5708177 RK050_C [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2110 gcaTTCCCCAggttt UUGGGGAA m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-4271 gcaTTCCCCaggttt GGGGGAAG m6b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-4667-5p gcatTCCCCAGgttt ACUGGGGA m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-4700-5p gcatTCCCCAGgttt UCUGGGGA m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-490-3p gcattccCCAGGTTt CAACCUGG m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-6716-5p gCATTCCCcaggttt UGGGAAUG m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-6850-5p gcaTTCCGCAggttt GUGCGGAA m7b Created HPSLB_7659_G9346.1_95475590
hsa-miR-6852-5p gcattCCCCAGGttt CCCUGGGG m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-7851-3p gcattcCCCAGGTtt UACCUGGG m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-8089 gcatTCCCCAGGttt CCUGGGGA m8a Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-2110 gcaTTCCCCAggttt UUGGGGAA m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-4271 gcaTTCCCCaggttt GGGGGAAG m6b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-4667-5p gcatTCCCCAGgttt ACUGGGGA m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-4700-5p gcatTCCCCAGgttt UCUGGGGA m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-490-3p gcattccCCAGGTTt CAACCUGG m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-6716-5p gCATTCCCcaggttt UGGGAAUG m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-6850-5p gcaTTCCGCAggttt GUGCGGAA m7b Created HPSLB_7659_G9346.1_95475590
hsa-miR-6852-5p gcattCCCCAGGttt CCCUGGGG m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-7851-3p gcattcCCCAGGTtt UACCUGGG m7b Disrupted HPSLB_7659_G9346.1_95475590
hsa-miR-8089 gcatTCCCCAGGttt CCUGGGGA m8a Disrupted HPSLB_7659_G9346.1_95475590

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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