SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001003800 |
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Gene Symbol: | BICD2 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr9:g.92718752C>T | COSM4906201 | TCGA-D3-A2JO-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3908 | acctgATTGCTatca | GAGCAAUG | m6b | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-3942-5p | acctgATTGCTatca | AAGCAAUA | m6b | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-4766-3p | acctgATTGCTATca | AUAGCAAU | m8a | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-4772-5p | aCCTGATCgctatca | UGAUCAGG | m7b | Disrupted | HPRO6_77873_G93405.1_95481036 |
hsa-miR-3908 | acctgATTGCTatca | GAGCAAUG | m6b | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-3942-5p | acctgATTGCTatca | AAGCAAUA | m6b | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-4766-3p | acctgATTGCTATca | AUAGCAAU | m8a | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-4772-5p | aCCTGATCgctatca | UGAUCAGG | m7b | Disrupted | HPRO6_77873_G93405.1_95481036 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr9:g.92718742C>T | COSM4781780 | TCGA-EE-A29H-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1245b-3p | taTCATCTGtgacca | UCAGAUGA | m7b | (m6b->m7b) | HPRO6_77873_G93405.1_95481036 |
hsa-miR-5683 | tatCATCTGTgacca | UACAGAUG | m7b | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-1245b-3p | taTCATCTGtgacca | UCAGAUGA | m7b | (m6b->m7b) | HPRO6_77873_G93405.1_95481036 |
hsa-miR-5683 | tatCATCTGTgacca | UACAGAUG | m7b | Created | HPRO6_77873_G93405.1_95481036 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr9:g.92718741G>A | COSM1111161 | TCGA-AP-A0LE-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-490-5p | atcATCCATGaccag | CCAUGGAU | m7b | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-5587-5p | atcatccGTGACCAg | AUGGUCAC | m7b | Disrupted | HPRO6_77873_G93405.1_95481036 |
hsa-miR-490-5p | atcATCCATGaccag | CCAUGGAU | m7b | Created | HPRO6_77873_G93405.1_95481036 |
hsa-miR-5587-5p | atcatccGTGACCAg | AUGGUCAC | m7b | Disrupted | HPRO6_77873_G93405.1_95481036 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr9:g.92713299C>G | COSN5708177 | RK050_C | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2110 | gcaTTCCCCAggttt | UUGGGGAA | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-4271 | gcaTTCCCCaggttt | GGGGGAAG | m6b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-4667-5p | gcatTCCCCAGgttt | ACUGGGGA | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-4700-5p | gcatTCCCCAGgttt | UCUGGGGA | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-490-3p | gcattccCCAGGTTt | CAACCUGG | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-6716-5p | gCATTCCCcaggttt | UGGGAAUG | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-6850-5p | gcaTTCCGCAggttt | GUGCGGAA | m7b | Created | HPRO6_77872_G93404.1_95475580 |
hsa-miR-6852-5p | gcattCCCCAGGttt | CCCUGGGG | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-7851-3p | gcattcCCCAGGTtt | UACCUGGG | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-8089 | gcatTCCCCAGGttt | CCUGGGGA | m8a | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-2110 | gcaTTCCCCAggttt | UUGGGGAA | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-4271 | gcaTTCCCCaggttt | GGGGGAAG | m6b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-4667-5p | gcatTCCCCAGgttt | ACUGGGGA | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-4700-5p | gcatTCCCCAGgttt | UCUGGGGA | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-490-3p | gcattccCCAGGTTt | CAACCUGG | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-6716-5p | gCATTCCCcaggttt | UGGGAAUG | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-6850-5p | gcaTTCCGCAggttt | GUGCGGAA | m7b | Created | HPRO6_77872_G93404.1_95475580 |
hsa-miR-6852-5p | gcattCCCCAGGttt | CCCUGGGG | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-7851-3p | gcattcCCCAGGTtt | UACCUGGG | m7b | Disrupted | HPRO6_77872_G93404.1_95475580 |
hsa-miR-8089 | gcatTCCCCAGGttt | CCUGGGGA | m8a | Disrupted | HPRO6_77872_G93404.1_95475580 |