SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001002909 |
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Gene Symbol: | GPATCH8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr17:g.44401269A>G | COSM1741265 | 064 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-194-3p | taataCCACTGGact | CCAGUGGG | m7a | Disrupted | HPTA3_8472_G13305.1_42478640 |
hsa-miR-199a-5p | taatacCACTGGact | CCCAGUGU | m6b | Disrupted | HPTA3_8472_G13305.1_42478640 |
hsa-miR-199b-5p | taatacCACTGGact | CCCAGUGU | m6b | Disrupted | HPTA3_8472_G13305.1_42478640 |
hsa-miR-4738-5p | taatacCGCTGGact | ACCAGCGC | m6b | Created | HPTA3_8472_G13305.1_42478640 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr17:g.44398664C>A | COSM979964 | TCGA-B5-A11N-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1273f | cccCCATCTCttggc | GGAGAUGG | m7b | Disrupted | HPTA3_8471_G13304.1_42476026 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr17:g.44398237C>A | COSM51912 | PD2144a | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2110 | atTTCCCCAgttatg | UUGGGGAA | m7b | (m7b->m6b) | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3153 | aTTTCCCCagttatg | GGGGAAAG | m7a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-4271 | atTTCCCCagttatg | GGGGGAAG | m6b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-450a-1-3p | atTTCCCAAgttatg | AUUGGGAA | m7b | (m6b->m7b) | HPTA3_8470_G13303.1_42475600 |
hsa-miR-4667-5p | attTCCCCAGTtatg | ACUGGGGA | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-4700-5p | attTCCCCAGttatg | UCUGGGGA | m7b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6733-5p | aTTTCCCAagttatg | UGGGAAAG | m7a | Created | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6739-5p | aTTTCCCAagttatg | UGGGAAAG | m7a | Created | HPTA3_8470_G13303.1_42475600 |
hsa-miR-8089 | attTCCCCAGttatg | CCUGGGGA | m7b | Disrupted | HPTA3_8470_G13303.1_42475600 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr17:g.44398223C>T | COSM3518078 | TCGA-EE-A3J5-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1273h-5p | gcaCCTCCCAGtggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-149-3p | gcaCCTCCCagtggg | AGGGAGGG | m6b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-181a-2-3p | gcacctcTCAGTGGg | ACCACUGA | m7b | Created | HPTA3_8470_G13303.1_42475600 |
hsa-miR-30b-3p | gcaCCTCCCAGtggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3192-5p | gcacCTCCCAGtggg | UCUGGGAG | m7b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3689a-3p | gcaCCTCCCAGtggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3689b-3p | gcaCCTCCCAGtggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3689c | gcaCCTCCCAGtggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3689d | gCACCTCCCagtggg | GGGAGGUG | m8a | (m8a->m7a) | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6761-5p | gcacCTCTCAGtggg | UCUGAGAG | m7b | Created | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6779-5p | gcaCCTCCCAGtggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6780a-5p | gcaCCTCCCAgtggg | UUGGGAGG | m7b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6799-5p | gcACCTCCCagtggg | GGGGAGGU | m7b | (m7b->m6b) | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6851-5p | gCACCTCCcagtggg | AGGAGGUG | m7b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6883-5p | gcaCCTCCCagtggg | AGGGAGGG | m6b | Disrupted | HPTA3_8470_G13303.1_42475600 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr17:g.44398222C>A | COSM4902709 | TCGA-GF-A6C9-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1273h-5p | caCCTCCCAGtgggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-149-3p | caCCTCCCagtgggg | AGGGAGGG | m6b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-30b-3p | caCCTCCCAGtgggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3192-5p | cacCTCCCAGtgggg | UCUGGGAG | m7b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3614-5p | cacctCCAAGTGGgg | CCACUUGG | m8a | Created | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3689a-3p | caCCTCCCAGtgggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3689b-3p | caCCTCCCAGtgggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3689c | caCCTCCCAGtgggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-3689d | CACCTCCCagtgggg | GGGAGGUG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-432-5p | cacCTCCAAGtgggg | UCUUGGAG | m7b | Created | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6779-5p | caCCTCCCAGtgggg | CUGGGAGG | m8a | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6780a-5p | caCCTCCCAgtgggg | UUGGGAGG | m7b | (m7b->m6b) | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6799-5p | cACCTCCCagtgggg | GGGGAGGU | m7b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-6883-5p | caCCTCCCagtgggg | AGGGAGGG | m6b | Disrupted | HPTA3_8470_G13303.1_42475600 |
hsa-miR-890 | caccTCCAAGTgggg | UACUUGGA | m7b | Created | HPTA3_8470_G13303.1_42475600 |