SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002909
Gene Symbol: GPATCH8

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.44400801A>G COSM1644638 06_2532 [salivary_gland][NS][carcinoma][adenoid_cystic_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3650 taatactACACACCc AGGUGUGU m7b Disrupted HHKTB_2367_NM_001002909|1313|1352|39.3664895865275|0.758309106789388
hsa-miR-16-1-3p tAATACTGcacaccc CCAGUAUU m7b Created HHKTB_2367_NM_001002909|1313|1352|39.3664895865275|0.758309106789388
hsa-miR-143-5p taatACTGCACaccc GGUGCAGU m7b Created HHKTB_2367_NM_001002909|1313|1352|39.3664895865275|0.758309106789388

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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