SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001002800 |
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Gene Symbol: | SMC4 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160433751A>C | COSM4114922 | TCGA-HU-A4HD-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4781-3p | acataCAACATaaca | AAUGUUGG | m6b | Disrupted | HPRO6_54258_G64469.1_160151545 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160433200T>G | COSM1040618 | TCGA-B5-A11N-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-let-7a-3p | ttgcaTTGTATAtat | CUAUACAA | m7b | Created | HPRO6_54257_G64467.1_160150983 |
hsa-let-7b-3p | ttgcaTTGTATAtat | CUAUACAA | m7b | Created | HPRO6_54257_G64467.1_160150983 |
hsa-let-7f-1-3p | ttgcaTTGTATAtat | CUAUACAA | m7b | Created | HPRO6_54257_G64467.1_160150983 |
hsa-miR-1185-1-3p | ttgcatTGTATATat | AUAUACAG | m7a | Created | HPRO6_54257_G64467.1_160150983 |
hsa-miR-1185-2-3p | ttgcatTGTATATat | AUAUACAG | m7a | Created | HPRO6_54257_G64467.1_160150983 |
hsa-miR-3163 | ttgcATTTTATAtat | UAUAAAAU | m8a | Disrupted | HPRO6_54257_G64467.1_160150983 |
hsa-miR-3662 | ttgCATTTTatatat | GAAAAUGA | m6b | Disrupted | HPRO6_54257_G64467.1_160150983 |
hsa-miR-410-3p | ttgcattTTATATat | AAUAUAAC | m6b | Disrupted | HPRO6_54257_G64467.1_160150983 |
hsa-miR-4666a-3p | ttgcATTGTATatat | CAUACAAU | m7b | Created | HPRO6_54257_G64467.1_160150983 |
hsa-miR-98-3p | ttgcaTTGTATAtat | CUAUACAA | m7b | Created | HPRO6_54257_G64467.1_160150983 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160433195G>T | COSM1720499 | 1_RESISTANT | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3646 | cattgtTTCATTTTa | AAAAUGAA | m8a | Created | HPRO6_54257_G64467.1_160150983 |
hsa-miR-3662 | cattgttTCATTTTa | GAAAAUGA | m7b | Created | HPRO6_54257_G64467.1_160150983 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160433136C>T | COSM1693699 | YUKLAB | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3173-3p | cccactCTCCTTTac | AAAGGAGG | m7a | Created | HPRO6_54256_G64466.1_160150917 |
hsa-miR-4428 | cccacTCTCCTTtac | CAAGGAGA | m7b | Created | HPRO6_54256_G64466.1_160150917 |
hsa-miR-4481 | CCCACTCCcctttac | GGAGUGGG | m8a | Disrupted | HPRO6_54256_G64466.1_160150917 |
hsa-miR-4693-3p | ccCACTCTCctttac | UGAGAGUG | m7b | (m6b->m7b) | HPRO6_54256_G64466.1_160150917 |
hsa-miR-5192 | cccACTCTCCTttac | AGGAGAGU | m8a | Created | HPRO6_54256_G64466.1_160150917 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160432462C>T | COSM1040614 | TCGA-AP-A059-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1469 | gggaCGCCGAactcg | CUCGGCGC | m6b | Disrupted | HPRO6_54255_G64465.2_160150226 |
hsa-miR-5000-5p | gggacgCTGAACTcg | CAGUUCAG | m7b | Created | HPRO6_54255_G64465.2_160150226 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160432459C>T | COSM3006111 | T3262 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1469 | gaggggaCGCCGAac | CUCGGCGC | m6b | Disrupted | HPRO6_54255_G64465.2_160150226 |
hsa-miR-324-5p | gagGGGATGCcgaac | CGCAUCCC | m7b | Created | HPRO6_54255_G64465.2_160150226 |
hsa-miR-4304 | gaggggATGCCGaac | CCGGCAUG | m6b | Created | HPRO6_54255_G64465.2_160150226 |
hsa-miR-6729-3p | gaGGGGATGccgaac | UCAUCCCC | m7b | (m6b->m7b) | HPRO6_54255_G64465.2_160150226 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160432440T>C | COSM4153006 | C0081T | [kidney][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1179 | taccaAATGCTTact | AAGCAUUC | m7a | Disrupted | HPRO6_54255_G64465.2_160150226 |
hsa-miR-5002-5p | tACCAAATgcttact | AAUUUGGU | m7b | Disrupted | HPRO6_54255_G64465.2_160150226 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160432417T>A | COSM4778041 | 24 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-129-5p | taaCAAAAAaattaa | CUUUUUGC | m6b | Created | HPRO6_54254_G64465.1_160150185 |
hsa-miR-32-3p | taacaaaTAAATTaa | CAAUUUAG | m6b | Disrupted | HPRO6_54254_G64465.1_160150185 |
hsa-miR-4775 | taacaaaAAAATTAa | UUAAUUUU | m7b | Created | HPRO6_54254_G64465.1_160150185 |
hsa-miR-590-3p | taacaaaAAAATTAa | UAAUUUUA | m7a | Created | HPRO6_54254_G64465.1_160150185 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160432325A>G | COSM4442149 | C467 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3942-5p | caaaATTGCTTatga | AAGCAAUA | m7a | Created | HPRO6_54253_G64464.1_160150119 |
hsa-miR-4775 | cAAAATTActtatga | UUAAUUUU | m7b | Disrupted | HPRO6_54253_G64464.1_160150119 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160431764T>C | COSM315444 | S00943 | [lung][NS][carcinoma][small_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2115-5p | gcactttTGGAAGCc | AGCUUCCA | m7b | Disrupted | HPRO6_54252_G64463.1_160149543 |
hsa-miR-526b-3p | GCACTTTCggaagcc | GAAAGUGC | m8a | Created | HPRO6_54252_G64463.1_160149543 |
hsa-miR-548az-5p | gCACTTTTGgaagcc | CAAAAGUG | m8a | (m8a->m7a) | HPRO6_54252_G64463.1_160149543 |
hsa-miR-548t-5p | gCACTTTTGgaagcc | CAAAAGUG | m8a | (m8a->m7a) | HPRO6_54252_G64463.1_160149543 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160404774C>T | COSN500331 | TCGA-BS-A0UL-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-122-3p | atatTGGCGTagtga | AACGCCAU | m6b | Disrupted | HPRO6_54241_G64448.1_160122550 |