SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001002800 |
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Gene Symbol: | SMC4 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.160432440T>C | COSM4153006 | C0081T | [kidney][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1179 | taccaAATGCTTact | AAGCAUUC | m7a | Disrupted | HPCB3_15573_G21359.1_160150227 |
hsa-miR-5002-5p | tACCAAATgcttact | AAUUUGGU | m7b | Disrupted | HPCB3_15573_G21359.1_160150227 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160431764T>C | COSM315444 | S00943 | [lung][NS][carcinoma][small_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2115-5p | gcactttTGGAAGCc | AGCUUCCA | m7b | Disrupted | HPCB3_15572_G21358.1_160149544 |
hsa-miR-526b-3p | GCACTTTCggaagcc | GAAAGUGC | m8a | Created | HPCB3_15572_G21358.1_160149544 |
hsa-miR-548az-5p | gCACTTTTGgaagcc | CAAAAGUG | m8a | (m8a->m7a) | HPCB3_15572_G21358.1_160149544 |
hsa-miR-548t-5p | gCACTTTTGgaagcc | CAAAAGUG | m8a | (m8a->m7a) | HPCB3_15572_G21358.1_160149544 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160431658C>T | COSM3006097 | KM12 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6499-3p | aatatCACTGCatcc | AGCAGUGU | m6b | Disrupted | HPCB3_15571_G21357.1_160149447 |
hsa-miR-106a-3p | aatatCATTGCAtcc | CUGCAAUG | m7b | Created | HPCB3_15571_G21357.1_160149447 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160431654A>G | COSM3006096 | Gp5D | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-153-5p | cAAAAATGtcactgc | UCAUUUUU | m7b | Created | HPCB3_15571_G21357.1_160149447 |
hsa-miR-3145-3p | caaAAATATCactgc | AGAUAUUU | m7b | Disrupted | HPCB3_15571_G21357.1_160149447 |
hsa-miR-3689a-5p | caaaaATATCACtgc | UGUGAUAU | m7b | Disrupted | HPCB3_15571_G21357.1_160149447 |
hsa-miR-3689b-5p | caaaaATATCACtgc | UGUGAUAU | m7b | Disrupted | HPCB3_15571_G21357.1_160149447 |
hsa-miR-3689e | caaaaATATCACtgc | UGUGAUAU | m7b | Disrupted | HPCB3_15571_G21357.1_160149447 |
hsa-miR-3689f | caaaaATATCACtgc | UGUGAUAU | m7b | Disrupted | HPCB3_15571_G21357.1_160149447 |
hsa-miR-5190 | caaaaatGTCACTGc | CCAGUGAC | m7b | Created | HPCB3_15571_G21357.1_160149447 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.160404774C>T | COSN500331 | TCGA-BS-A0UL-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-122-3p | atatTGGCGTagtga | AACGCCAU | m6b | Disrupted | HPCB3_15565_G21351.1_160122549 |