SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001002258
Gene Symbol: ATP5G3
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.175177946A>C COSN6155310 RK193_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-5p ttCATATCAaggata UGAUAUGU m7a (m6a->m7a) HPCB3_13544_G18453.1_176042685
hsa-miR-190b ttCATATCAaggata UGAUAUGU m7a (m6a->m7a) HPCB3_13544_G18453.1_176042685
hsa-miR-362-5p ttcatatCAAGGATa AAUCCUUG m7b Created HPCB3_13544_G18453.1_176042685
hsa-miR-500b-5p ttcatatCAAGGATa AAUCCUUG m7b Created HPCB3_13544_G18453.1_176042685
hsa-miR-501-5p ttcatatAAAGGATa AAUCCUUU m7b Disrupted HPCB3_13544_G18453.1_176042685
hsa-miR-502-5p ttcatatCAAGGATa AUCCUUGC m7a Created HPCB3_13544_G18453.1_176042685
hsa-miR-6083 ttcATATAAaggata CUUAUAUC m6b Disrupted HPCB3_13544_G18453.1_176042685

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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