SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001001992 |
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Gene Symbol: | USP16 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr21:g.29054182C>A | COSM173172 | TCGA-AG-A002-01 | [large_intestine][rectum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-101-3p | gagaaTACTGTAata | UACAGUAC | m7a | Disrupted | HPRO6_50201_G59506.1_30426516 |
hsa-miR-144-3p | gagaATACTGTAata | UACAGUAU | m8a | Disrupted | HPRO6_50201_G59506.1_30426516 |
hsa-miR-16-1-3p | gagAATACTGtaata | CCAGUAUU | m7b | Disrupted | HPRO6_50201_G59506.1_30426516 |
hsa-miR-323a-3p | gagaaTAATGTaata | CACAUUAC | m6b | Created | HPRO6_50201_G59506.1_30426516 |
hsa-miR-630 | gAGAATACTgtaata | AGUAUUCU | m8a | (m8a->m7a) | HPRO6_50201_G59506.1_30426516 |
hsa-miR-6504-3p | gagaataCTGTAATa | CAUUACAG | m7b | Disrupted | HPRO6_50201_G59506.1_30426516 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr21:g.29046800A>G | COSM1681906 | HCT-15 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-758-5p | tcCAACCATatttca | GAUGGUUG | m7b | (m7b->m6b) | HPRO6_50195_G59500.1_30419111 |
hsa-miR-584-5p | tccAACCATAtttca | UUAUGGUU | m7b | Disrupted | HPRO6_50195_G59500.1_30419111 |
hsa-miR-5583-3p | tccaaCCATATTtca | GAAUAUGG | m7b | Disrupted | HPRO6_50195_G59500.1_30419111 |
hsa-miR-758-5p | tcCAACCATatttca | GAUGGUUG | m7b | (m7b->m6b) | HPRO6_50195_G59500.1_30419111 |
hsa-miR-218-2-3p | tccAACCATatttca | CAUGGUUC | m6b | Disrupted | HPRO6_50195_G59500.1_30419111 |
hsa-miR-5583-3p | tccaaCCATATTtca | GAAUAUGG | m7b | Disrupted | HPRO6_50195_G59500.1_30419111 |
hsa-miR-584-5p | tccAACCATAtttca | UUAUGGUU | m7b | Disrupted | HPRO6_50195_G59500.1_30419111 |
hsa-miR-218-2-3p | tccAACCATatttca | CAUGGUUC | m6b | Disrupted | HPRO6_50195_G59500.1_30419111 |