SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001974
Gene Symbol: PLEKHA1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.122429689C>A COSM915578 TCGA-D1-A174-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4316 ccgccaCCTCACatt GGUGAGGC m6b Disrupted HPTA1_1758_G2407.1_124189211
hsa-miR-6134 ccgCCACCTCAcatt UGAGGUGG m8a Disrupted HPTA1_1758_G2407.1_124189211
hsa-miR-6815-5p ccGCCACCTcacatt UAGGUGGC m7b (m7b->m6b) HPTA1_1758_G2407.1_124189211
hsa-miR-6865-5p ccGCCACCTcacatt UAGGUGGC m7b (m7b->m6b) HPTA1_1758_G2407.1_124189211
hsa-miR-1294 ccgccACCTCACAtt UGUGAGGU m8a Disrupted HPTA1_1758_G2407.1_124189211

Mutation Mutation ID Sample Name Cancer Type
chr10:g.122429684G>A COSM2056881 TCGA-HU-A4GT-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6815-5p agccaccGCCACCTc UAGGUGGC m7b Disrupted HPTA1_1758_G2407.1_124189211
hsa-miR-6865-5p agccaccGCCACCTc UAGGUGGC m7b Disrupted HPTA1_1758_G2407.1_124189211

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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