SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001701
Gene Symbol: C4orf3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.119300513T>G COSM319095 134417 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6884-3p ccgggtgGTGATGGt CCCAUCAC m7b Created HHRBC_9781_BC3-2of3-SCL_12116
hsa-miR-21-3p ccgGGTGTTGatggt CAACACCA m7a Disrupted HHRBC_9781_BC3-2of3-SCL_12116
hsa-miR-197-3p ccggGTGGTGAtggt UUCACCAC m7b Created HHRBC_9781_BC3-2of3-SCL_12116

Mutation Mutation ID Sample Name Cancer Type
chr4:g.119300502G>A COSM1539113 TCGA-50-5946-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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