SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001664
Gene Symbol: SPOPL

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.138569074G>C COSM1193130 H838 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5000-3p taaaacaGTCCTGAa UCAGGACA m7a Disrupted HPSEF_12359_G14848.1_139326643
hsa-miR-452-5p taAAACAGTcctgaa AACUGUUU m7b (m7b->m6b) HPSEF_12359_G14848.1_139326643
hsa-miR-4676-3p taAAACAGTcctgaa CACUGUUU m7b (m7b->m6b) HPSEF_12359_G14848.1_139326643
hsa-miR-4768-3p taaaacaCTCCTGaa CCAGGAGA m6b Created HPSEF_12359_G14848.1_139326643
hsa-miR-8083 taaaacAGTCCTGaa CAGGACUU m7a Disrupted HPSEF_12359_G14848.1_139326643
hsa-miR-892c-3p taAAACAGTcctgaa CACUGUUU m7b (m7b->m6b) HPSEF_12359_G14848.1_139326643
hsa-miR-3659 taaAACACTCctgaa UGAGUGUU m7b Created HPSEF_12359_G14848.1_139326643
hsa-miR-122-5p taaaACACTCCtgaa UGGAGUGU m7b Created HPSEF_12359_G14848.1_139326643
hsa-miR-3169 taaaaCAGTCCTgaa UAGGACUG m7b Disrupted HPSEF_12359_G14848.1_139326643
hsa-miR-4433a-3p taaaacACTCCTGaa ACAGGAGU m7b Created HPSEF_12359_G14848.1_139326643
hsa-miR-4433b-3p taaaaCACTCCTGaa CAGGAGUG m8a Created HPSEF_12359_G14848.1_139326643
hsa-miR-4436a taaaacaGTCCTGaa GCAGGACA m6b Disrupted HPSEF_12359_G14848.1_139326643
hsa-miR-4459 taaaacaCTCCTGaa CCAGGAGG m6b Created HPSEF_12359_G14848.1_139326643

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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