SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001653
Gene Symbol: MED8

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.43385098C>T COSM3741289 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-489-3p gaaaATGTCAagtgg GUGACAUC m6b Created HPCB3_1457_G2014.1_43850776
hsa-miR-1256 gaaAATGCCaagtgg AGGCAUUG m6b Disrupted HPCB3_1457_G2014.1_43850776
hsa-miR-3614-5p gaaaatgCCAAGTGg CCACUUGG m7b Disrupted HPCB3_1457_G2014.1_43850776
hsa-miR-4642 gaaaATGCCAagtgg AUGGCAUC m6b Disrupted HPCB3_1457_G2014.1_43850776
hsa-miR-1250-3p GAAAATGTcaagtgg ACAUUUUC m8a Created HPCB3_1457_G2014.1_43850776
hsa-miR-489-3p gaaaATGTCAagtgg GUGACAUC m6b Created HPCB3_1457_G2014.1_43850776
hsa-miR-3614-5p gaaaatgCCAAGTGg CCACUUGG m7b Disrupted HPCB3_1457_G2014.1_43850776
hsa-miR-4642 gaaaATGCCAagtgg AUGGCAUC m6b Disrupted HPCB3_1457_G2014.1_43850776
hsa-miR-1256 gaaAATGCCaagtgg AGGCAUUG m6b Disrupted HPCB3_1457_G2014.1_43850776

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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