SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001001485 |
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Gene Symbol: | ATP2C1 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.130996736C>T | COSM3587462 | TCGA-EB-A5UN-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3159 | ccTAATCCTctcaat | UAGGAUUA | m7b | (m7b->m6b) | HPSEF_15268_G18386.1_130715582 |
hsa-miR-1253 | cctaaTCTTCTCaat | AGAGAAGA | m7b | Created | HPSEF_15268_G18386.1_130715582 |
hsa-miR-6859-5p | cctaaTCCTCTCaat | GAGAGGAA | m7a | Disrupted | HPSEF_15268_G18386.1_130715582 |
hsa-miR-6859-5p | cctaaTCCTCTCaat | GAGAGGAA | m7a | Disrupted | HPSEF_15268_G18386.1_130715582 |
hsa-miR-6770-5p | cctaatCTTCTCAat | UGAGAAGG | m7a | Created | HPSEF_15268_G18386.1_130715582 |
hsa-miR-6770-5p | cctaatCTTCTCAat | UGAGAAGG | m7a | Created | HPSEF_15268_G18386.1_130715582 |
hsa-miR-4699-5p | cctAATCTTCTcaat | AGAAGAUU | m8a | Created | HPSEF_15268_G18386.1_130715582 |
hsa-miR-1253 | cctaaTCTTCTCaat | AGAGAAGA | m7b | Created | HPSEF_15268_G18386.1_130715582 |
hsa-miR-3159 | ccTAATCCTctcaat | UAGGAUUA | m7b | (m7b->m6b) | HPSEF_15268_G18386.1_130715582 |
hsa-miR-4699-5p | cctAATCTTCTcaat | AGAAGAUU | m8a | Created | HPSEF_15268_G18386.1_130715582 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.130996715C>A | COSM1419028 | TCGA-AA-3861-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-32-3p | ttggCTAAATTaatg | CAAUUUAG | m7b | Created | HPSEF_15268_G18386.1_130715582 |
hsa-miR-3668 | ttggCTACATTaatg | AAUGUAGA | m7a | Disrupted | HPSEF_15268_G18386.1_130715582 |
hsa-miR-4662a-5p | TTGGCTAAattaatg | UUAGCCAA | m8a | Created | HPSEF_15268_G18386.1_130715582 |