SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001436
Gene Symbol: C16orf87

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.46809719T>A COSM3818000 TCGA-OL-A5RZ-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20b-3p tCTACAGTaaataaa ACUGUAGU m7a Disrupted HPCB3_8802_G12120.1_46843638
hsa-miR-4652-3p tctACAGAAaataaa GUUCUGUU m6b Created HPCB3_8802_G12120.1_46843638
hsa-miR-4693-5p tctACAGTAaataaa AUACUGUG m6b Disrupted HPCB3_8802_G12120.1_46843638
hsa-miR-4699-3p tctacAGTAAATaaa AAUUUACU m7b Disrupted HPCB3_8802_G12120.1_46843638
hsa-miR-4743-3p tctACAGAAAataaa UUUCUGUC m7a Created HPCB3_8802_G12120.1_46843638

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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