SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001433
Gene Symbol: STX16
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.58651771G>T COSN2522084
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7161-3p agAGATCTAagtctg UAGAUCUU m7a (m6a->m7a) HHHSH_3732_STX16|NM_001001433|exon_utr5|-7.17049154982299|-0.101718899100183

Mutation Mutation ID Sample Name Cancer Type
chr20:g.58651767G>C COSN2522083
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3675-3p gctTAGAGATcgaag CAUCUCUA m7b Disrupted HHHSH_3732_STX16|NM_001001433|exon_utr5|-7.17049154982299|-0.101718899100183
hsa-miR-520f-5p gcTTAGAGatcgaag CCUCUAAA m6b Disrupted HHHSH_3732_STX16|NM_001001433|exon_utr5|-7.17049154982299|-0.101718899100183
Mutation Mutation ID Sample Name Cancer Type
chr20:g.58651719G>T COSN2522082
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr20:g.58651510G>C COSN2522081
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146b-3p gtccaaACAGGGCct UGCCCUGU m7b Created HHHSH_3731_STX16|NM_001001433|exon_utr5|-7.38963542332066|-0.738936696950317
hsa-miR-1291 gtccaaaCAGGGCCt UGGCCCUG m7b Created HHHSH_3731_STX16|NM_001001433|exon_utr5|-7.38963542332066|-0.738936696950317
hsa-miR-7850-5p GTCCAAACagggcct GUUUGGAC m8a Created HHHSH_3731_STX16|NM_001001433|exon_utr5|-7.38963542332066|-0.738936696950317
hsa-miR-6775-3p gtccaaaCAGGGCCt AGGCCCUG m7b Created HHHSH_3731_STX16|NM_001001433|exon_utr5|-7.38963542332066|-0.738936696950317
hsa-miR-6740-5p gtCCAAACagggcct AGUUUGGG m6b Created HHHSH_3731_STX16|NM_001001433|exon_utr5|-7.38963542332066|-0.738936696950317

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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