SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001415
Gene Symbol: ZNF429

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537368A>G COSM286857 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p ttCCTCTGCacttac AGCAGAGG m7b (m6b->m7b) HPTK1_14501_G17216.1_21720163
hsa-miR-3125 TTCCTCTAcacttac UAGAGGAA m8a Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-3678-3p ttcCTCTGCActtac CUGCAGAG m7b Created HPTK1_14501_G17216.1_21720163
hsa-miR-372-3p ttcctctGCACTTac AAAGUGCU m6b Created HPTK1_14501_G17216.1_21720163
hsa-miR-373-3p ttcctctGCACTTac GAAGUGCU m6b Created HPTK1_14501_G17216.1_21720163
hsa-miR-4280 ttcctCTACACTtac GAGUGUAG m7b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-519a-3p ttcctcTGCACTTac AAAGUGCA m7b Created HPTK1_14501_G17216.1_21720163
hsa-miR-519b-3p ttcctcTGCACTTac AAAGUGCA m7b Created HPTK1_14501_G17216.1_21720163
hsa-miR-519c-3p ttcctcTGCACTTac AAAGUGCA m7b Created HPTK1_14501_G17216.1_21720163
hsa-miR-520a-3p ttcctctGCACTTac AAAGUGCU m6b Created HPTK1_14501_G17216.1_21720163
hsa-miR-520b ttcctctGCACTTac AAAGUGCU m6b Created HPTK1_14501_G17216.1_21720163
hsa-miR-520c-3p ttcctctGCACTTac AAAGUGCU m6b Created HPTK1_14501_G17216.1_21720163
hsa-miR-520d-3p ttcctctGCACTTac AAAGUGCU m6b Created HPTK1_14501_G17216.1_21720163
hsa-miR-520e ttcctctGCACTTac AAAGUGCU m6b Created HPTK1_14501_G17216.1_21720163
hsa-miR-595 ttcctctACACTTac GAAGUGUG m6b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-6832-5p ttcCTCTACacttac AGUAGAGA m6b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-6847-5p tTCCTCTGcacttac ACAGAGGA m7b Created HPTK1_14501_G17216.1_21720163
hsa-miR-877-5p tTCCTCTACacttac GUAGAGGA m8a (m8a->m7a) HPTK1_14501_G17216.1_21720163
Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537358C>T COSM4463786 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537351T>C COSM1559522 TCGA-06-0211-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1251-3p gGCAAAGCttttacc CGCUUUGC m7b Created HPTK1_14501_G17216.1_21720163
hsa-miR-320a ggcaaAGCTTTTacc AAAAGCUG m7a Created HPTK1_14501_G17216.1_21720163
hsa-miR-320b ggcaaAGCTTTTacc AAAAGCUG m7a Created HPTK1_14501_G17216.1_21720163
hsa-miR-320c ggcaaAGCTTTTacc AAAAGCUG m7a Created HPTK1_14501_G17216.1_21720163
hsa-miR-320d ggcaaAGCTTTTacc AAAAGCUG m7a Created HPTK1_14501_G17216.1_21720163
hsa-miR-4429 ggcaaAGCTTTTacc AAAAGCUG m7a Created HPTK1_14501_G17216.1_21720163
hsa-miR-548ac ggcaaaGTTTTTacc CAAAAACC m6b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548ae-3p ggcaaAGTTTTTacc CAAAAACU m7b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548ah-3p ggcaaAGTTTTTacc CAAAAACU m7b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548aj-3p ggcaaAGTTTTTAcc UAAAAACU m8a Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548am-3p ggcaaAGTTTTTacc CAAAAACU m7b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548aq-3p ggcaaAGTTTTTacc CAAAAACU m7b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548az-3p ggcaaAGTTTTTacc AAAAACUG m7a Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548bb-3p ggcaaaGTTTTTacc CAAAAACC m6b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548d-3p ggcaaaGTTTTTacc CAAAAACC m6b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548e-3p ggcaaAGTTTTTacc AAAAACUG m7a Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548e-5p ggcaaaGCTTTTacc CAAAAGCA m6b Created HPTK1_14501_G17216.1_21720163
hsa-miR-548f-3p ggcaaAGTTTTTacc AAAAACUG m7a Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548h-3p ggcaaaGTTTTTacc CAAAAACC m6b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548j-3p ggcaaAGTTTTTacc CAAAAACU m7b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548x-3p ggcaaAGTTTTTAcc UAAAAACU m8a Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-548z ggcaaaGTTTTTacc CAAAAACC m6b Disrupted HPTK1_14501_G17216.1_21720163
hsa-miR-5582-3p ggcaAAGTTTTtacc UAAAACUU m7b Disrupted HPTK1_14501_G17216.1_21720163

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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