SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001415
Gene Symbol: ZNF429

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537042G>T COSM1559507 TCGA-06-0132-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1246 cttactATCCATaag AAUGGAUU m6b Created HPSEF_11168_G13390.1_21719843
hsa-miR-1261 cttacTATCCATaag AUGGAUAA m7a Created HPSEF_11168_G13390.1_21719843
hsa-miR-135a-5p cttactAGCCATAag UAUGGCUU m7a Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-135b-5p cttactAGCCATAag UAUGGCUU m7a Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-5191 cttaCTATCCataag AGGAUAGG m6b Created HPSEF_11168_G13390.1_21719843
hsa-miR-6069 cttaCTAGCCataag GGGCUAGG m6b Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-628-3p cTTACTAGccataag UCUAGUAA m7b Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-8074 cttactaGCCATAag CUAUGGCG m6b Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-889-5p cttactAGCCATaag AAUGGCUG m6b Disrupted HPSEF_11168_G13390.1_21719843

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537042G>A COSM439077 TCGA-BH-A0AW-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135a-5p cttactAGCCATAag UAUGGCUU m7a Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-135b-5p cttactAGCCATAag UAUGGCUU m7a Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-218-2-3p cttactAACCATaag CAUGGUUC m6b Created HPSEF_11168_G13390.1_21719843
hsa-miR-584-5p cttactAACCATAAg UUAUGGUU m8a Created HPSEF_11168_G13390.1_21719843
hsa-miR-6069 cttaCTAGCCataag GGGCUAGG m6b Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-628-3p cTTACTAGccataag UCUAGUAA m7b Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-758-5p cttactAACCATaag GAUGGUUG m6b Created HPSEF_11168_G13390.1_21719843
hsa-miR-8074 cttactaGCCATAag CUAUGGCG m6b Disrupted HPSEF_11168_G13390.1_21719843
hsa-miR-889-5p cttactAGCCATaag AAUGGCUG m6b Disrupted HPSEF_11168_G13390.1_21719843

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21536950C>A COSM993694 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-409-3p cctCAACATTtacta GAAUGUUG m7b Created HPSEF_11167_G13389.1_21719737
hsa-miR-548m cctcaACCTTTacta CAAAGGUA m6b Disrupted HPSEF_11167_G13389.1_21719737

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21536930A>G COSM4743809 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1251-3p tgGCAAAGCctttag CGCUUUGC m7b (m6b->m7b) HPSEF_11167_G13389.1_21719737
hsa-miR-19a-5p tgGCAAAACctttag AGUUUUGC m7b (m7b->m6b) HPSEF_11167_G13389.1_21719737
hsa-miR-19b-1-5p tgGCAAAACctttag AGUUUUGC m7b (m7b->m6b) HPSEF_11167_G13389.1_21719737
hsa-miR-19b-2-5p tgGCAAAACctttag AGUUUUGC m7b (m7b->m6b) HPSEF_11167_G13389.1_21719737
hsa-miR-329-5p tggcAAAACCTttag GAGGUUUU m7b Disrupted HPSEF_11167_G13389.1_21719737
hsa-miR-4484 tggcaaaGCCTTTag AAAAGGCG m6b Created HPSEF_11167_G13389.1_21719737
hsa-miR-548an tggcaaaGCCTTTag AAAAGGCA m6b Created HPSEF_11167_G13389.1_21719737
hsa-miR-548m tggcaaaACCTTTag CAAAGGUA m6b Disrupted HPSEF_11167_G13389.1_21719737
hsa-miR-6768-3p tggcaaaGCCTTTag CAAAGGCC m6b Created HPSEF_11167_G13389.1_21719737

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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