SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001415
Gene Symbol: ZNF429

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537462G>T COSM1189976 LC_S18 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1246 cttactATCCATagg AAUGGAUU m6b Created HHFCT_78777_cluster-11395_2_6
hsa-miR-1261 cttacTATCCATagg AUGGAUAA m7a Created HHFCT_78777_cluster-11395_2_6
hsa-miR-5191 cttaCTATCCatagg AGGAUAGG m6b Created HHFCT_78777_cluster-11395_2_6
hsa-miR-6069 cttaCTAGCCatagg GGGCUAGG m6b Disrupted HHFCT_78777_cluster-11395_2_6
hsa-miR-628-3p cTTACTAGccatagg UCUAGUAA m7b Disrupted HHFCT_78777_cluster-11395_2_6
hsa-miR-889-5p cttactAGCCATagg AAUGGCUG m6b Disrupted HHFCT_78777_cluster-11395_2_6

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537254A>G COSM1559517 TCGA-12-0618-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1305 atTTGAAAAatgtgg UUUUCAAC m7a (m7a->m6a) HHFCT_78776_cluster-11395_1_7
hsa-miR-153-5p atttgAAAAATGtgg UCAUUUUU m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-676-5p atTTGAAGAatgtgg UCUUCAAC m7a (m6a->m7a) HHFCT_78776_cluster-11395_1_7

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537249T>G COSM1559516 TCGA-06-0127-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1305 tacaaatTTGAAAAa UUUUCAAC m7a Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-130a-5p tacaAATGTGAAaaa UUCACAUU m8a Created HHFCT_78776_cluster-11395_1_7
hsa-miR-23a-3p tacaAATGTGAaaaa AUCACAUU m7b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-23b-3p tacaAATGTGAaaaa AUCACAUU m7b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-23c tacaAATGTGAaaaa AUCACAUU m7b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-3671 tacaaATTTGAaaaa AUCAAAUA m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-5096 tacaaatGTGAAAaa GUUUCACC m6b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-607 tacaaATTTGAAaaa GUUCAAAU m7b Disrupted HHFCT_78776_cluster-11395_1_7

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537241C>T COSM4076192 TCGA-BR-8683-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p aggaaCCCTACAaat AUGUAGGG m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-23a-5p aGGAACCCtacaaat GGGGUUCC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-23b-5p aGGAACCCtacaaat UGGGUUCC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-296-3p aggAACCCTacaaat GAGGGUUG m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-3674 aggaaccCTACAAat AUUGUAGA m6b Disrupted HHFCT_78776_cluster-11395_1_7

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537238A>G COSM1559514 TCGA-06-0125-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-23a-5p gagaGGAACCCtaca GGGGUUCC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-23b-5p gagaGGAACCCtaca UGGGUUCC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-296-3p gagaggAACCCTaca GAGGGUUG m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-3158-3p gagaggAGCCCTaca AAGGGCUU m6b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-4268 gaGAGGAGCCctaca GGCUCCUC m8a Created HHFCT_78776_cluster-11395_1_7
hsa-miR-4326 gaGAGGAACcctaca UGUUCCUC m7b (m7b->m6b) HHFCT_78776_cluster-11395_1_7
hsa-miR-4446-3p gagaggAGCCCTaca CAGGGCUG m6b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-5088-5p gagagGAGCCCTaca CAGGGCUC m7b Created HHFCT_78776_cluster-11395_1_7

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537238A>C COSM1559515 TCGA-02-0074-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-23a-5p gagaGGAACCCtaca GGGGUUCC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-23b-5p gagaGGAACCCtaca UGGGUUCC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-296-3p gagaggAACCCTaca GAGGGUUG m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-3909 gAGAGGACccctaca UGUCCUCU m7b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-4326 gaGAGGAACcctaca UGUUCCUC m7b (m7b->m6b) HHFCT_78776_cluster-11395_1_7
hsa-miR-615-5p gagaGGACCCCtaca GGGGGUCC m7b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-6789-5p gagaggaCCCCTACa GUAGGGGC m7a Created HHFCT_78776_cluster-11395_1_7
hsa-miR-6824-5p gagaggaCCCCTACa GUAGGGGA m7a Created HHFCT_78776_cluster-11395_1_7
hsa-miR-6852-3p gAGAGGACccctaca UGUCCUCU m7b Created HHFCT_78776_cluster-11395_1_7

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537236G>A COSM1559513 TCGA-12-0618-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-23a-5p tggagaGGAACCCta GGGGUUCC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-23b-5p tggagaGGAACCCta UGGGUUCC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-3183 tgGAGAGGaacccta GCCUCUCU m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-4326 tggaGAGGAACccta UGUUCCUC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-4768-5p tgGAGAGAAacccta AUUCUCUC m7b (m6b->m7b) HHFCT_78776_cluster-11395_1_7
hsa-miR-6769b-3p tgGAGAGGaacccta CCCUCUCU m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-6780a-3p tggAGAGGAacccta CUCCUCUG m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-6809-3p tggAGAGAAacccta CUUCUCUU m6b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-6833-3p tgGAGAGAAAcccta UUUCUCUC m8a Created HHFCT_78776_cluster-11395_1_7
hsa-miR-6845-3p tGGAGAGGaacccta CCUCUCCU m7a Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-6873-3p tgGAGAGAAacccta UUCUCUCU m7a (m6a->m7a) HHFCT_78776_cluster-11395_1_7
hsa-miR-6881-3p tggAGAGGAacccta AUCCUCUU m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-7111-3p tgGAGAGGAacccta AUCCUCUC m7b (m7b->m6b) HHFCT_78776_cluster-11395_1_7

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537231G>C COSM3822496 TCGA-AO-A03M-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1184 cataCTGCAGaggaa CCUGCAGC m6b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-16-1-3p cATACTGGagaggaa CCAGUAUU m7a Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-17-3p catACTGCAGaggaa ACUGCAGU m7b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-3158-5p cataCTGCAGaggaa CCUGCAGA m6b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-3183 catactgGAGAGGaa GCCUCUCU m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-3925-3p catACTGGAGaggaa ACUCCAGU m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-4723-3p catactgGAGAGGaa CCCUCUCU m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-6769b-3p catactgGAGAGGaa CCCUCUCU m6b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-6780a-3p catactgCAGAGGAa CUCCUCUG m7b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-6845-3p catactGGAGAGGaa CCUCUCCU m7a Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-7111-3p catactgGAGAGGAa AUCCUCUC m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-766-3p cataCTGGAGaggaa ACUCCAGC m6b Disrupted HHFCT_78776_cluster-11395_1_7

Mutation Mutation ID Sample Name Cancer Type
chr19:g.21537228C>A COSM300355 TCGA-AA-A01V-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-5p attcatAATGGAGag ACUCCAUU m7b Created HHFCT_78776_cluster-11395_1_7
hsa-miR-16-1-3p attcATACTGGagag CCAGUAUU m7a Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-3925-3p attcatACTGGAGag ACUCCAGU m7b Disrupted HHFCT_78776_cluster-11395_1_7
hsa-miR-766-3p attcataCTGGAGag ACUCCAGC m6b Disrupted HHFCT_78776_cluster-11395_1_7

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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