SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001132
Gene Symbol: ITSN1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33837723A>G COSN8611704 J38_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4517 taaTCATATTgcatt AAAUAUGA m7b Disrupted HHFCT_98582_cluster-14899_10_40

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33823602C>T COSM1030413 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3655 cagtgggCGACAAGg GCUUGUCG m7b Disrupted HHFCT_98577_cluster-14899_5_241
hsa-miR-500b-3p cagTGGGTGacaagg GCACCCAG m6b Created HHFCT_98577_cluster-14899_5_241
hsa-miR-6879-3p cagtGGGTGACAagg UGUCACCC m8a Created HHFCT_98577_cluster-14899_5_241

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33823586G>A COSM312096 S01728 [lung][NS][carcinoma][mixed_small_cell_carcinoma-adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6748-3p gactggtGGACAGGa UCCUGUCC m7b Disrupted HHFCT_98577_cluster-14899_5_241
hsa-miR-5699-3p gactggtAGACAGGa UCCUGUCU m7b Created HHFCT_98577_cluster-14899_5_241
hsa-miR-4733-3p gaCTGGTGGacagga CCACCAGG m7a (m7a->m6a) HHFCT_98577_cluster-14899_5_241
hsa-miR-4421 gactggtAGACAGGa ACCUGUCU m7b Created HHFCT_98577_cluster-14899_5_241
hsa-miR-3120-5p gactggtAGACAGGa CCUGUCUG m7a Created HHFCT_98577_cluster-14899_5_241

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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