SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000983
Gene Symbol: RPL22
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6199573A>T COSM1731332 092T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.6199573A>C COSM227966 ME041T [skin][trunk][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6837-5p tgccGCCCTGGctcc ACCAGGGC m7b Created HPCB3_1253_G1751.1_6259634
hsa-miR-3141 tgCCGCCCTggctcc GAGGGCGG m7b (m6b->m7b) HPCB3_1253_G1751.1_6259634
hsa-miR-4685-5p tgccGCCCTGGctcc CCCAGGGC m7b Created HPCB3_1253_G1751.1_6259634
hsa-miR-6770-3p tGCCGCCAtggctcc CUGGCGGC m7b Disrupted HPCB3_1253_G1751.1_6259634

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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