SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000983
Gene Symbol: RPL22
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6199573A>T COSM1731332 092T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.6199573A>C COSM227966 ME041T [skin][trunk][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3141 tgCCGCCCTggctcc GAGGGCGG m7b (m6b->m7b) HHFCT_411_uc001amd.1_11_35
hsa-miR-4685-5p tgccGCCCTGGctcc CCCAGGGC m7b Created HHFCT_411_uc001amd.1_11_35
hsa-miR-6770-3p tGCCGCCAtggctcc CUGGCGGC m7b Disrupted HHFCT_411_uc001amd.1_11_35
hsa-miR-6837-5p tgccGCCCTGGctcc ACCAGGGC m7b Created HHFCT_411_uc001amd.1_11_35

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6199561G>A COSM3700767 RK110_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-3p tcCTGTGGTtagtat UACCACAG m7b (m7b->m6b) HHFCT_411_uc001amd.1_11_35
hsa-miR-34b-3p tcctGTGATTagtat CAAUCACU m6b Created HHFCT_411_uc001amd.1_11_35
hsa-miR-513a-5p tCCTGTGAttagtat UUCACAGG m7b Created HHFCT_411_uc001amd.1_11_35
hsa-miR-6776-3p tcctGTGGTTagtat CAACCACC m6b Disrupted HHFCT_411_uc001amd.1_11_35

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197732A>AA COSM2238063 55 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p gggggGCAAAAAaaa CUUUUUGC m7b Disrupted HHFCT_409_uc001amd.1_9_41

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197724G>AG COSM1343741 TCGA-CM-5861-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p aaaaaAAGAAGCaag AGCUUCUU m7b Disrupted HHFCT_409_uc001amd.1_9_41
hsa-miR-3977 aaaaaaaGAAGCAag GUGCUUCA m6b Disrupted HHFCT_409_uc001amd.1_9_41

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197724AG>G COSM179404 SNU-C2B [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p aaaaaaAAGAAGCaag AGCUUCUU m7b Disrupted HHFCT_409_uc001amd.1_9_41
hsa-miR-3977 aaaaaaaGAAGCAag GUGCUUCA m6b Created HHFCT_409_uc001amd.1_9_41

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197724AAG>G COSM2238062 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p caaaaaaAAGAAGCaag AGCUUCUU m7b Disrupted HHFCT_409_uc001amd.1_9_41

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197723A>AA COSM4167695 TLE10 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_T_cell_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p aaaaAAGAAGCaagt AGCUUCUU m7b Disrupted HHFCT_409_uc001amd.1_9_41
hsa-miR-3160-5p aaaaaAGAAAGCaagt GGCUUUCU m7b Created HHFCT_409_uc001amd.1_9_41
hsa-miR-3977 aaaaaaGAAGCAagt GUGCUUCA m6b Disrupted HHFCT_409_uc001amd.1_9_41

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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