SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000950
Gene Symbol: PRRG1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.37455431C>A COSN9487481 AOCS-091-1-3 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203a-3p atgagagATTTCACa GUGAAAUG m7a Created HHFCT_167312_cluster-23769_29_14
hsa-miR-216b-5p atgAGAGATTTcaca AAAUCUCU m8a Created HHFCT_167312_cluster-23769_29_14
hsa-miR-6796-3p atgAGAGCTTtcaca GAAGCUCU m7b Disrupted HHFCT_167312_cluster-23769_29_14

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453561A>G COSM3992469 TCGA-BQ-7056-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-591 aggaCATGGTCaact AGACCAUG m7b Created HHFCT_167302_cluster-23769_19_52

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453553G>T COSM462239 TCGA-DS-A0VM-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-676-3p agagtatTAGGACAt CUGUCCUA m7b Created HHFCT_167302_cluster-23769_19_52
hsa-miR-6891-3p agagtATGAGGacat CCCUCAUC m6b Disrupted HHFCT_167302_cluster-23769_19_52
hsa-miR-8084 agAGTATTaggacat GAAUACUA m6b Created HHFCT_167302_cluster-23769_19_52

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453547G>A COSM4841592 TCGA-C5-A1BI-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p acccccaAAGTATGa ACAUACUU m7b Created HHFCT_167302_cluster-23769_19_52
hsa-miR-326 accCCCAGAGtatga CCUCUGGG m7b Disrupted HHFCT_167302_cluster-23769_19_52
hsa-miR-330-5p accCCCAGAGtatga UCUCUGGG m7b Disrupted HHFCT_167302_cluster-23769_19_52
hsa-miR-3664-5p accccCAGAGTatga AACUCUGU m6b Disrupted HHFCT_167302_cluster-23769_19_52
hsa-miR-4260 acCCCCAAagtatga CUUGGGGC m6b Created HHFCT_167302_cluster-23769_19_52
hsa-miR-450a-2-3p acCCCCAAagtatga AUUGGGGA m6b Created HHFCT_167302_cluster-23769_19_52
hsa-miR-4714-5p accccCAGAGTatga AACUCUGA m6b Disrupted HHFCT_167302_cluster-23769_19_52
hsa-miR-514a-5p acccCCAGAGTAtga UACUCUGG m8a Disrupted HHFCT_167302_cluster-23769_19_52
hsa-miR-5572 acCCCCAAagtatga GUUGGGGU m6b Created HHFCT_167302_cluster-23769_19_52

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453401C>G COSM757348 TCGA-22-4613-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1254 ttgtcTCCAGGCTtt AGCCUGGA m8a Disrupted HHFCT_167301_cluster-23769_18_19
hsa-miR-3116 ttgtcTCCAGGCttt UGCCUGGA m7b Disrupted HHFCT_167301_cluster-23769_18_19
hsa-miR-4254 ttgtCTCCAGGCttt GCCUGGAG m8a Disrupted HHFCT_167301_cluster-23769_18_19
hsa-miR-7109-3p ttgtctcGAGGCTTt CAAGCCUC m7b Created HHFCT_167301_cluster-23769_18_19

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453396G>T COSM612430 TCGA-50-5049-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4434 gtggattTTCTCCag AGGAGAAG m6b Created HHFCT_167301_cluster-23769_18_19
hsa-miR-4516 gtggattTTCTCCag GGGAGAAG m6b Created HHFCT_167301_cluster-23769_18_19
hsa-miR-4531 gtggattTTCTCCAg AUGGAGAA m7b Created HHFCT_167301_cluster-23769_18_19
hsa-miR-4668-3p gtGGATTTTCtccag GAAAAUCC m8a Created HHFCT_167301_cluster-23769_18_19
hsa-miR-539-5p gtggatTTTCTCCag GGAGAAAU m7a Created HHFCT_167301_cluster-23769_18_19
hsa-miR-5703 gtggattTTCTCCag AGGAGAAG m6b Created HHFCT_167301_cluster-23769_18_19

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453325C>T COSM3561567 TCGA-EE-A20C-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-3p ccACATTCCtttccc UGGAAUGU m7b (m7b->m6b) HHFCT_167300_cluster-23769_17_12
hsa-miR-206 ccACATTCCtttccc UGGAAUGU m7b (m7b->m6b) HHFCT_167300_cluster-23769_17_12
hsa-miR-5680 ccaCATTTCTttccc GAGAAAUG m7b Created HHFCT_167300_cluster-23769_17_12
hsa-miR-613 ccACATTCCTttccc AGGAAUGU m8a Disrupted HHFCT_167300_cluster-23769_17_12

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453314A>G COSM4792568 CHC1749T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3925-3p gtgACTGGAGgccac ACUCCAGU m7b Created HHFCT_167300_cluster-23769_17_12
hsa-miR-4704-3p GTGACTGAaggccac UCAGUCAC m8a Disrupted HHFCT_167300_cluster-23769_17_12
hsa-miR-4757-5p gtgactgGAGGCCac AGGCCUCU m6b Created HHFCT_167300_cluster-23769_17_12
hsa-miR-6744-3p gtgactgGAGGCCac GGGCCUCU m6b Created HHFCT_167300_cluster-23769_17_12
hsa-miR-6878-3p gtgactgGAGGCCAc CUGGCCUC m7b Created HHFCT_167300_cluster-23769_17_12

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453313G>A COSM3844620 TCGA-D8-A1JA-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4704-3p aGTGACTGAaggcca UCAGUCAC m8a (m8a->m7a) HHFCT_167300_cluster-23769_17_12

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453299G>A COSM3372253 TCGA-EM-A22P-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3120-5p actcgtAGACAGaca CCUGUCUG m6b Disrupted HHFCT_167300_cluster-23769_17_12
hsa-miR-6888-3p actcgtAGACAGAca AUCUGUCU m7b Disrupted HHFCT_167300_cluster-23769_17_12

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453295C>T COSM1722555 TCGA-EE-A2A0-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3618 caaaactTGTAGACa UGUCUACA m7b Created HHFCT_167300_cluster-23769_17_12

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37376247C>A COSN9487467 AOCS-126-1-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4540 tGGACTAAatcgatt UUAGUCCU m7a Created HHFCT_167290_cluster-23769_6_8
hsa-miR-7852-3p tggACTACATcgatt UAUGUAGU m7b Disrupted HHFCT_167290_cluster-23769_6_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser