SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000946 |
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Gene Symbol: | PRIM1 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr12:g.56752298A>G | COSM4150261 | AOCS-150-3-1 | [ovary][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1273g-3p | gcgctCAGTGGagac | ACCACUGC | m6b | Created | HPRO6_21006_G24452.1_57146076 |
hsa-miR-136-5p | gcgctcAATGGAGac | ACUCCAUU | m7b | Disrupted | HPRO6_21006_G24452.1_57146076 |
hsa-miR-181a-2-3p | gcgcTCAGTGGagac | ACCACUGA | m7b | Created | HPRO6_21006_G24452.1_57146076 |
hsa-miR-6509-3p | gcgctCAGTGGAgac | UUCCACUG | m7b | Created | HPRO6_21006_G24452.1_57146076 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.56752296G>A | COSM3463577 | TCGA-EE-A29D-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-136-5p | gctcAATGGAGacgt | ACUCCAUU | m7b | Disrupted | HPRO6_21006_G24452.1_57146076 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.56752285A>C | COSM4997965 | PDA_004 | [pancreas][NS][carcinoma][ductal_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-7704 | acgtttGACCCCacc | CGGGGUCG | m6b | Disrupted | HPRO6_21006_G24452.1_57146076 |
hsa-miR-4472 | acgtttgCCCCCACc | GGUGGGGG | m7b | Created | HPRO6_21006_G24452.1_57146076 |
hsa-miR-4697-5p | acgtttGCCCCCacc | AGGGGGCG | m6b | Created | HPRO6_21006_G24452.1_57146076 |
hsa-miR-4488 | acgtttGCCCCCacc | AGGGGGCG | m6b | Created | HPRO6_21006_G24452.1_57146076 |
hsa-miR-4470 | acGTTTGCCcccacc | UGGCAAAC | m7b | (m6b->m7b) | HPRO6_21006_G24452.1_57146076 |
hsa-miR-4447 | acgtttgCCCCCACc | GGUGGGGG | m7b | Created | HPRO6_21006_G24452.1_57146076 |
hsa-miR-1237-5p | acgtttGCCCCCacc | CGGGGGCG | m6b | Created | HPRO6_21006_G24452.1_57146076 |
hsa-miR-6742-5p | acgtttgACCCCACc | AGUGGGGU | m7b | Disrupted | HPRO6_21006_G24452.1_57146076 |
hsa-miR-615-5p | acgtttGACCCCacc | GGGGGUCC | m6b | Disrupted | HPRO6_21006_G24452.1_57146076 |