SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000921
Gene Symbol: PDE3A
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680179T>A COSM4922924 TCGA-BC-A10T-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3616-5p gtcgcaCACTTCAga AUGAAGUG m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-4709-3p gtcgcaCTCTTCAga UUGAAGAG m7b Disrupted HHFCT_36633_uc001reh.1_86_45
hsa-miR-4795-5p gtcgcaCACTTCaga AGAAGUGG m6b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-573 gtcgcaCACTTCAGa CUGAAGUG m8a Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-595 gtcgCACACTTCaga GAAGUGUG m8a Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-648 gtcGCACACTTcaga AAGUGUGC m8a Created HHFCT_36633_uc001reh.1_86_45

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680174C>T COSM4488450 CSCC-16-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p cctcagTTGCACTct CAGUGCAA m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-130b-3p cctcagTTGCACTct CAGUGCAA m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-301a-3p cctcagTTGCACTct CAGUGCAA m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-301b-3p cctcagTTGCACTct CAGUGCAA m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-3666 cctcagTTGCACTct CAGUGCAA m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-4295 cctcagTTGCACTct CAGUGCAA m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-454-3p cctcagTTGCACTct UAGUGCAA m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-6857-3p cCTCAGTCgcactct UGACUGAG m7b Disrupted HHFCT_36633_uc001reh.1_86_45

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680170C>T COSM3459055 TCGA-GN-A269-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3936 gACCCCTTAgtcgca UAAGGGGU m8a (m7a->m8a) HHFCT_36633_uc001reh.1_86_45
hsa-miR-5194 gACCCCTCAgtcgca UGAGGGGU m8a (m8a->m7a) HHFCT_36633_uc001reh.1_86_45
hsa-miR-6734-5p gaCCCCTCAgtcgca UUGAGGGG m7b (m7b->m6b) HHFCT_36633_uc001reh.1_86_45
hsa-miR-6857-3p gacccCTCAGTCgca UGACUGAG m7b Disrupted HHFCT_36633_uc001reh.1_86_45

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680157G>A COSM3459054 TCGA-D3-A2JO-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-198 aatccCTGGACCaga GGUCCAGA m7a Disrupted HHFCT_36633_uc001reh.1_86_45
hsa-miR-3663-5p aatccctAGACCAGa GCUGGUCU m7b Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-4685-5p aatCCCTGGaccaga CCCAGGGC m6b Disrupted HHFCT_36633_uc001reh.1_86_45
hsa-miR-601 aatccCTAGACCAga UGGUCUAG m8a Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-6754-5p aaTCCCTGGaccaga CCAGGGAG m7a (m7a->m6a) HHFCT_36633_uc001reh.1_86_45
hsa-miR-6837-5p aatCCCTGGaccaga ACCAGGGC m6b Disrupted HHFCT_36633_uc001reh.1_86_45
hsa-miR-7113-5p aaTCCCTGGAccaga UCCAGGGA m8a Disrupted HHFCT_36633_uc001reh.1_86_45
hsa-miR-7152-3p aatccctGGACCAGa UCUGGUCC m7b Disrupted HHFCT_36633_uc001reh.1_86_45
hsa-miR-8078 aatcCCTAGACCaga GGUCUAGG m8a Created HHFCT_36633_uc001reh.1_86_45

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680149C>T COSM1705258 YUCLAT [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4775 agAAAATTAAtccct UUAAUUUU m8a Created HHFCT_36633_uc001reh.1_86_45
hsa-miR-590-3p agAAAATTAatccct UAAUUUUA m7a (m6a->m7a) HHFCT_36633_uc001reh.1_86_45

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680103G>A COSM230248 ME049T [NS][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-5p agATGTGAAagaaag UUCACAUU m7a (m6a->m7a) HHFCT_36632_uc001reh.1_85_69
hsa-miR-23a-3p agATGTGAaagaaag AUCACAUU m6b Created HHFCT_36632_uc001reh.1_85_69
hsa-miR-23b-3p agATGTGAaagaaag AUCACAUU m6b Created HHFCT_36632_uc001reh.1_85_69
hsa-miR-23c agATGTGAaagaaag AUCACAUU m6b Created HHFCT_36632_uc001reh.1_85_69
hsa-miR-3692-3p agaTGTGGAAgaaag GUUCCACA m7b Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-6875-3p agatgtGGAAGAAag AUUCUUCC m7b Disrupted HHFCT_36632_uc001reh.1_85_69

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680084T>C COSM1237203 6 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3607-3p cacctcTTACAGaac ACUGUAAA m6b Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-3686 cacctcTTACAGAac AUCUGUAA m7b Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-4677-3p cacctCTCACAGAac UCUGUGAG m8a Created HHFCT_36632_uc001reh.1_85_69
hsa-miR-4679 cacctcTCACAGAac UCUGUGAU m7a Created HHFCT_36632_uc001reh.1_85_69

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680071A>T COSM4040726 TCGA-BR-A4PD-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-3p ccAAATATCTcagca AGAUAUUU m8a Created HHFCT_36632_uc001reh.1_85_69
hsa-miR-4424 ccaaaTAACTCagca AGAGUUAA m6b Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-4682 ccaaatAACTCAGca UCUGAGUU m7b Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-8077 ccaaataACTCAGCa GGCUGAGU m7b Disrupted HHFCT_36632_uc001reh.1_85_69

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680060A>G COSM4187519 BK0043 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-5p aaaatctACTGCCAa UGGCAGUG m7a Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-34c-5p aaaatctACTGCCaa AGGCAGUG m6b Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-376a-2-5p aaAATCTACtgccaa GGUAGAUU m7b (m7b->m6b) HHFCT_36632_uc001reh.1_85_69
hsa-miR-449a aaaatctACTGCCAa UGGCAGUG m7a Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-449b-5p aaaatctACTGCCaa AGGCAGUG m6b Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-548au-3p aaaatctACTGCCAa UGGCAGUU m7a Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-885-3p aaaatctGCTGCCaa AGGCAGCG m6b Created HHFCT_36632_uc001reh.1_85_69
hsa-miR-922 aaaaTCTGCTGCcaa GCAGCAGA m8a Created HHFCT_36632_uc001reh.1_85_69
hsa-miR-936 aaaaTCTACTGccaa ACAGUAGA m7b Disrupted HHFCT_36632_uc001reh.1_85_69

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20680058C>A COSM937848 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376a-2-5p gaaaAATCTACtgcc GGUAGAUU m7b Disrupted HHFCT_36632_uc001reh.1_85_69
hsa-miR-936 gaaaaaTCTACTGcc ACAGUAGA m7b Disrupted HHFCT_36632_uc001reh.1_85_69

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20663665T>A COSN10103049 C0035T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-1-3p atTGTATATacccag AUAUACAG m7a (m6a->m7a) HHFCT_36629_uc001reh.1_82_941
hsa-miR-1185-2-3p atTGTATATacccag AUAUACAG m7a (m6a->m7a) HHFCT_36629_uc001reh.1_82_941
hsa-miR-503-3p attgtatATACCCag GGGGUAUU m6b Created HHFCT_36629_uc001reh.1_82_941
hsa-miR-555 attgtatTTACCCag AGGGUAAG m6b Disrupted HHFCT_36629_uc001reh.1_82_941
hsa-miR-98-3p aTTGTATAtacccag CUAUACAA m7b Created HHFCT_36629_uc001reh.1_82_941

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20551552G>C COSN8705121 AOCS-088-3-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1244 ctAACTACTTacgcg AAGUAGUU m8a Created HHFCT_36601_uc001reh.1_44_19228
hsa-miR-3923 ctaACTAGTTacgcg AACUAGUA m7a Disrupted HHFCT_36601_uc001reh.1_44_19228
hsa-miR-562 ctaaCTACTTacgcg AAAGUAGC m6b Created HHFCT_36601_uc001reh.1_44_19228
hsa-miR-708-3p ctaaCTAGTTacgcg CAACUAGA m6b Disrupted HHFCT_36601_uc001reh.1_44_19228

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20437716A>G COSN5319660 RK124_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6717-5p tctCATCGCCTctaa AGGCGAUG m8a Created HHFCT_36581_uc001reh.1_22_32
hsa-miR-6866-5p tctcatcGCCTCTAa UUAGAGGC m7b Created HHFCT_36581_uc001reh.1_22_32
hsa-miR-7854-3p tctcaTCACCTCtaa UGAGGUGA m7b Disrupted HHFCT_36581_uc001reh.1_22_32

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20407060C>A COSN14997554 LP6005690-DNA_C01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1265 tgatagACATCCTGt CAGGAUGU m8a Disrupted HHFCT_36571_uc001reh.1_11_174
hsa-miR-3167 tgataGAAATCCTgt AGGAUUUC m8a Created HHFCT_36571_uc001reh.1_11_174
hsa-miR-876-5p tgataGAAATCCtgt UGGAUUUC m7b Created HHFCT_36571_uc001reh.1_11_174

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20405890C>A COSN10103005 C0012T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1249-5p cctatTCCCTCCacc AGGAGGGA m7b Disrupted HHFCT_36570_uc001reh.1_10_215
hsa-miR-504-3p cctattCACTCCacc GGGAGUGC m6b Created HHFCT_36570_uc001reh.1_10_215
hsa-miR-5585-3p cCTATTCActccacc CUGAAUAG m7b Created HHFCT_36570_uc001reh.1_10_215
hsa-miR-6515-5p cctattCCCTCCAcc UUGGAGGG m7b Disrupted HHFCT_36570_uc001reh.1_10_215
hsa-miR-6797-5p cctatTCCCTCCacc AGGAGGGA m7b Disrupted HHFCT_36570_uc001reh.1_10_215
hsa-miR-7847-3p cctattcCCTCCACc CGUGGAGG m7b Disrupted HHFCT_36570_uc001reh.1_10_215

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20370002C>A COSM1511497 TCGA-86-6851-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-122-3p accttacATGGCGTa AACGCCAU m7b Created HHFCT_36565_uc001reh.1_2_201

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20369857G>A COSM182729 TCGA-AA-3877-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6801-3p ccgccGCAGGGGTgg ACCCCUGC m8a Created HHFCT_36564_uc001reh.1_1_43
hsa-miR-6810-3p ccgccGCAGGGGtgg UCCCCUGC m7b Created HHFCT_36564_uc001reh.1_1_43

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20369856CG>C COSM4613309 LIM2405 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3960 cCCGCCGCgggggtgg GGCGGCGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43
hsa-miR-8072 cCCGCCGCgggggtgg GGCGGCGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20369856C>T COSM1261744 ESO-1670 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3960 cCCGCCGCgggggtg GGCGGCGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43
hsa-miR-8072 cCCGCCGCgggggtg GGCGGCGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20369856C>CG COSM4612734 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3960 cCCGCCGCgggggtg GGCGGCGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43
hsa-miR-8072 cCCGCCGCgggggtg GGCGGCGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20369854C>T COSM4822929 TCGA-EK-A2R9-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1908-5p tCCCCGCCGcggggg CGGCGGGG m8a (m8a->m7a) HHFCT_36564_uc001reh.1_1_43
hsa-miR-3960 tccCCGCCGCggggg GGCGGCGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43
hsa-miR-4706 TCCCCGCTgcggggg AGCGGGGA m8a Created HHFCT_36564_uc001reh.1_1_43
hsa-miR-4781-5p tCCCCGCTgcggggg UAGCGGGG m7b Created HHFCT_36564_uc001reh.1_1_43
hsa-miR-663a tCCCCGCCgcggggg AGGCGGGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43
hsa-miR-6787-5p tCCCCGCCgcggggg UGGCGGGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43
hsa-miR-8072 tccCCGCCGCggggg GGCGGCGG m7b Disrupted HHFCT_36564_uc001reh.1_1_43

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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