SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000919
Gene Symbol: PAM

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.103029420C>A COSN4841127 tumor_4174905 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-5p ccaataGCACTTTca AAAAGUGC m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-106b-5p ccaataGCACTTTca UAAAGUGC m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-148a-5p ccaatAGAACTTTca AAAGUUCU m8a Created HHFCT_129267_cluster-18158_29_370
hsa-miR-17-5p ccaataGCACTTTca CAAAGUGC m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-20a-5p ccaataGCACTTTca UAAAGUGC m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-20b-5p ccaataGCACTTTca CAAAGUGC m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-302a-3p ccaatAGCACTTtca UAAGUGCU m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-302b-3p ccaatAGCACTTtca UAAGUGCU m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-302c-3p ccaatAGCACTTtca UAAGUGCU m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-302d-3p ccaatAGCACTTtca UAAGUGCU m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-302e ccaatAGCACTTtca UAAGUGCU m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-3168 ccaaTAGAACTttca GAGUUCUA m7b Created HHFCT_129267_cluster-18158_29_370
hsa-miR-372-3p ccaatAGCACTTTca AAAGUGCU m8a Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-373-3p ccaatAGCACTTtca GAAGUGCU m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-4482-3p ccAATAGAActttca UUUCUAUU m7b (m6b->m7b) HHFCT_129267_cluster-18158_29_370
hsa-miR-519d-3p ccaataGCACTTTca CAAAGUGC m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-520a-3p ccaatAGCACTTTca AAAGUGCU m8a Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-520b ccaatAGCACTTTca AAAGUGCU m8a Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-520c-3p ccaatAGCACTTTca AAAGUGCU m8a Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-520d-3p ccaatAGCACTTTca AAAGUGCU m8a Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-520e ccaatAGCACTTTca AAAGUGCU m8a Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-526b-3p ccaataGCACTTTCa GAAAGUGC m8a Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-93-5p ccaataGCACTTTca CAAAGUGC m7b Disrupted HHFCT_129267_cluster-18158_29_370

Mutation Mutation ID Sample Name Cancer Type
chr5:g.103029337G>T COSN8491641 3844_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p aatGGAAGATttgcc CAUCUUCC m7b Disrupted HHFCT_129267_cluster-18158_29_370
hsa-miR-4762-5p aatggaAGATTTGcc CCAAAUCU m7b Disrupted HHFCT_129267_cluster-18158_29_370

Mutation Mutation ID Sample Name Cancer Type
chr5:g.103029157T>C COSN2055462 RK027_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p ttaATTGCAaactgt CUGCAAUG m6b Created HHFCT_129264_cluster-18158_26_54
hsa-miR-450b-5p ttaaTTGCAAActgt UUUUGCAA m7b Created HHFCT_129264_cluster-18158_26_54
hsa-miR-7849-3p ttAATTGTaaactgt GACAAUUG m6b Disrupted HHFCT_129264_cluster-18158_26_54

Mutation Mutation ID Sample Name Cancer Type
chr5:g.103029016A>G COSM481719 TCGA-BP-4770-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 gaaTCAGGAGaggag CUCCUGAG m7a Created HHFCT_129262_cluster-18158_24_21
hsa-miR-1236-3p gaatcaGAAGAGGag CCUCUUCC m7a Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-1976 gaatCAGGAGaggag CCUCCUGC m6b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-3182 gaatCAGAAGaggag GCUUCUGU m6b Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-3183 gaatcagGAGAGGag GCCUCUCU m6b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-3192-3p gaATCAGAagaggag CUCUGAUC m6b Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-3653-5p gaaTCAGGAGaggag CCUCCUGA m7b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-378a-5p gaaTCAGGAGaggag CUCCUGAC m7a Created HHFCT_129262_cluster-18158_24_21
hsa-miR-4723-3p gaatcagGAGAGGag CCCUCUCU m6b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-4762-3p gaATCAGAAGaggag CUUCUGAU m8a Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-6769b-3p gaatcagGAGAGGag CCCUCUCU m6b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-6845-3p gaatcAGGAGAGGag CCUCUCCU m8a Created HHFCT_129262_cluster-18158_24_21
hsa-miR-6881-3p gaatcagAAGAGGAg AUCCUCUU m7b Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-7111-3p gaatcagGAGAGGAg AUCCUCUC m7b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-877-3p gaatcaGAAGAGGAg UCCUCUUC m8a Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-1200 gaaTCAGGAGaggag CUCCUGAG m7a Created HHFCT_129262_cluster-18158_24_21
hsa-miR-1236-3p gaatcaGAAGAGGag CCUCUUCC m7a Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-1976 gaatCAGGAGaggag CCUCCUGC m6b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-3182 gaatCAGAAGaggag GCUUCUGU m6b Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-3183 gaatcagGAGAGGag GCCUCUCU m6b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-3192-3p gaATCAGAagaggag CUCUGAUC m6b Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-3653-5p gaaTCAGGAGaggag CCUCCUGA m7b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-378a-5p gaaTCAGGAGaggag CUCCUGAC m7a Created HHFCT_129262_cluster-18158_24_21
hsa-miR-4723-3p gaatcagGAGAGGag CCCUCUCU m6b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-4762-3p gaATCAGAAGaggag CUUCUGAU m8a Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-6769b-3p gaatcagGAGAGGag CCCUCUCU m6b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-6845-3p gaatcAGGAGAGGag CCUCUCCU m8a Created HHFCT_129262_cluster-18158_24_21
hsa-miR-6881-3p gaatcagAAGAGGAg AUCCUCUU m7b Disrupted HHFCT_129262_cluster-18158_24_21
hsa-miR-7111-3p gaatcagGAGAGGAg AUCCUCUC m7b Created HHFCT_129262_cluster-18158_24_21
hsa-miR-877-3p gaatcaGAAGAGGAg UCCUCUUC m8a Disrupted HHFCT_129262_cluster-18158_24_21

Mutation Mutation ID Sample Name Cancer Type
chr5:g.103028947G>A COSM1431999 TCGA-AZ-6605-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-943 tACAGTCAaaaaggg CUGACUGU m7b Created HHFCT_129261_cluster-18158_22_14
hsa-miR-3136-5p taCAGTCAaaaaggg CUGACUGA m6b Created HHFCT_129261_cluster-18158_22_14
hsa-miR-4439 taCAGTCAaaaaggg GUGACUGA m6b Created HHFCT_129261_cluster-18158_22_14
hsa-miR-943 tACAGTCAaaaaggg CUGACUGU m7b Created HHFCT_129261_cluster-18158_22_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.103028946C>T COSM4343743 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1305 ctacaGTTGAAAAgg UUUUCAAC m8a Created HHFCT_129261_cluster-18158_22_14
hsa-miR-1305 ctacaGTTGAAAAgg UUUUCAAC m8a Created HHFCT_129261_cluster-18158_22_14
hsa-miR-1305 ctacaGTTGAAAAgg UUUUCAAC m8a Created HHFCT_129261_cluster-18158_22_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.103028931C>T COSM1219171 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-600 tgcaagCTGTAAGgg ACUUACAG m7b Created HHFCT_129260_cluster-18158_21_14
hsa-miR-600 tgcaagCTGTAAGgg ACUUACAG m7b Created HHFCT_129260_cluster-18158_21_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.103028917ATTTC>A COSM1633870 RK100_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser