SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000906
Gene Symbol: NPR1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.153683799C>T COSM3474479 TCGA-EE-A2GM-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p cggcaTTCTGATtgt CAUCAGAA m7b Disrupted HHFCT_12570_uc001fcs.2_1_1077
hsa-miR-4698 cggCATTTTGAttgt UCAAAAUG m8a Created HHFCT_12570_uc001fcs.2_1_1077

Mutation Mutation ID Sample Name Cancer Type
chr1:g.153683786C>T COSM3474478 TCGA-EB-A41A-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6856-5p gCCTCTCTTtgctcg AAGAGAGG m8a (m7a->m8a) HHFCT_12570_uc001fcs.2_1_1077
hsa-miR-4311 gccTCTCTTTgctcg GAAAGAGA m7b Created HHFCT_12570_uc001fcs.2_1_1077
hsa-miR-4428 gccTCTCCTTGctcg CAAGGAGA m8a Disrupted HHFCT_12570_uc001fcs.2_1_1077

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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