SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000864
Gene Symbol: HTR1D
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.23193383C>T COSM1724029 4_RESISTANT [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-100-3p tgaaaatCAAGCTTg CAAGCUUG m7b Disrupted HHFCT_1157_uc001bgn.1_5_20
hsa-miR-4775 tgAAAATTAAgcttg UUAAUUUU m8a Created HHFCT_1157_uc001bgn.1_5_20
hsa-miR-590-3p tgAAAATTAagcttg UAAUUUUA m7a (m6a->m7a) HHFCT_1157_uc001bgn.1_5_20

Mutation Mutation ID Sample Name Cancer Type
chr1:g.23193378T>A COSM4920560 TCGA-DD-A3A9-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4310 atcaagcATGCTGac GCAGCAUU m6b Created HHFCT_1157_uc001bgn.1_5_20
hsa-miR-1273e aTCAAGCAtgctgac UUGCUUGA m7b Created HHFCT_1157_uc001bgn.1_5_20
hsa-miR-100-3p atCAAGCTTGctgac CAAGCUUG m8a Disrupted HHFCT_1157_uc001bgn.1_5_20

Mutation Mutation ID Sample Name Cancer Type
chr1:g.23193357G>T COSM357146 LUAD-CHTN-3090415 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8081 ctggaACTCAAGagg CUUGAGUC m7a Created HHFCT_1157_uc001bgn.1_5_20
hsa-miR-526b-5p ctggaaCTCAAGAGg CUCUUGAG m8a Created HHFCT_1157_uc001bgn.1_5_20

Mutation Mutation ID Sample Name Cancer Type
chr1:g.23193265G>A COSM240167 TCGA-HU-A4GQ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8060 cttCTTCATGGtgtc CCAUGAAG m8a Created HHFCT_1156_uc001bgn.1_3_12
Mutation Mutation ID Sample Name Cancer Type
chr1:g.23193256C>T COSM3485502 TCGA-D3-A1Q6-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.23193152C>A COSM3485501 TCGA-EB-A5UN-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216a-3p taatctaCACTGTGt UCACAGUG m7b Disrupted HHFCT_1155_uc001bgn.1_2_13
hsa-miR-3681-3p taatctaCACTGTGt ACACAGUG m7b Disrupted HHFCT_1155_uc001bgn.1_2_13
hsa-miR-376a-2-5p tAATCTACactgtgt GGUAGAUU m7b Disrupted HHFCT_1155_uc001bgn.1_2_13
hsa-miR-376a-5p tAATCTACactgtgt GUAGAUUC m7a Disrupted HHFCT_1155_uc001bgn.1_2_13
hsa-miR-4280 taatCTACACTgtgt GAGUGUAG m7b Disrupted HHFCT_1155_uc001bgn.1_2_13
hsa-miR-4760-5p tAATCTAAActgtgt UUUAGAUU m8a (m7a->m8a) HHFCT_1155_uc001bgn.1_2_13
hsa-miR-8061 tAATCTAAactgtgt CUUAGAUU m7b Created HHFCT_1155_uc001bgn.1_2_13
hsa-miR-128-3p taatctaCACTGTGt UCACAGUG m7b Disrupted HHFCT_1155_uc001bgn.1_2_13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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