SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000819 |
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Gene Symbol: | GART |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33517125G>A | COSM1030308 | TCGA-D1-A16N-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3186-5p | ttctcACGCCTacca | CAGGCGUC | m6b | Disrupted | HPRO6_50898_G60314.1_34889429 |
hsa-miR-3650 | ttctCACACCTacca | AGGUGUGU | m7a | Created | HPRO6_50898_G60314.1_34889429 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33517071C>T | COSM578927 | TCGA-64-5778-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-302b-5p | gacatGTTAAAGcct | ACUUUAAC | m7b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-302c-5p | gacATGTTAAAgcct | UUUAACAU | m8a | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-302d-5p | gacatGTTAAAGcct | ACUUUAAC | m7b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-3143 | gacATGTTAaagcct | AUAACAUU | m6b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-489-3p | gacATGTCAaagcct | GUGACAUC | m6b | Disrupted | HPRO6_50897_G60313.1_34889351 |
hsa-miR-514a-3p | gacaTGTCAAagcct | AUUGACAC | m6b | Disrupted | HPRO6_50897_G60313.1_34889351 |
hsa-miR-514b-3p | gacaTGTCAAagcct | AUUGACAC | m6b | Disrupted | HPRO6_50897_G60313.1_34889351 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33517065C>A | COSM3841795 | TCGA-A7-A425-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-105-5p | tcaaaGCATTTGccc | UCAAAUGC | m7b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-7853-5p | tcaaaGCATTTGccc | UCAAAUGC | m7b | Created | HPRO6_50897_G60313.1_34889351 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33517061G>C | COSM393489 | LUAD-E00934 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2110 | agcctTTCCCCAtat | UUGGGGAA | m7b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-3153 | agcCTTTCCCCatat | GGGGAAAG | m8a | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-4271 | agcctTTCCCCatat | GGGGGAAG | m6b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-6733-5p | agcCTTTCCCcatat | UGGGAAAG | m7b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-6739-5p | agcCTTTCCCcatat | UGGGAAAG | m7b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-6810-5p | agccttTCCCCATat | AUGGGGAC | m7a | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-6890-5p | agcctttCCCCATat | CAUGGGGU | m6b | Created | HPRO6_50897_G60313.1_34889351 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33517059C>T | COSM3550360 | TCGA-EE-A2GJ-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4517 | cctttgcTCATATTa | AAAUAUGA | m7b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-556-5p | cctttGCTCATatta | GAUGAGCU | m6b | Created | HPRO6_50897_G60313.1_34889351 |
hsa-miR-5583-3p | cctttgcCCATATTa | GAAUAUGG | m7b | Disrupted | HPRO6_50897_G60313.1_34889351 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33517046G>A | COSM4648444 | RKO | [large_intestine][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4691-5p | tactggTGGAGGAtt | GUCCUCCA | m7b | Disrupted | HPRO6_50897_G60313.1_34889351 |
hsa-miR-4733-3p | taCTGGTGGaggatt | CCACCAGG | m7a | (m7a->m6a) | HPRO6_50897_G60313.1_34889351 |
hsa-miR-6792-3p | tactggTGGAGGAtt | CUCCUCCA | m7b | Disrupted | HPRO6_50897_G60313.1_34889351 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33517043G>T | COSM4101306 | TCGA-F1-6874-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4691-5p | tggTGGAGGAttact | GUCCUCCA | m7b | Disrupted | HPRO6_50897_G60313.1_34889351 |
hsa-miR-6792-3p | tggTGGAGGAttact | CUCCUCCA | m7b | Disrupted | HPRO6_50897_G60313.1_34889351 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33505591C>A | COSM3841794 | TCGA-AN-A046-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-186-5p | gagaATTCTTTctgg | CAAAGAAU | m7b | Disrupted | HPRO6_50894_G60310.1_34877888 |
hsa-miR-5692a | gagaATTATTTctgg | CAAAUAAU | m7b | Created | HPRO6_50894_G60310.1_34877888 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33505584G>A | COSM3963922 | J76_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3936 | ctttctgACCCCTTt | UAAGGGGU | m7b | Created | HPRO6_50894_G60310.1_34877888 |
hsa-miR-4640-5p | ctttCTGGCCCcttt | UGGGCCAG | m7b | Disrupted | HPRO6_50894_G60310.1_34877888 |
hsa-miR-4726-5p | ctttCTGGCCCcttt | AGGGCCAG | m7b | Disrupted | HPRO6_50894_G60310.1_34877888 |
hsa-miR-6762-5p | ctttcTGGCCCCttt | CGGGGCCA | m7b | Disrupted | HPRO6_50894_G60310.1_34877888 |
hsa-miR-6801-5p | cttTCTGACCccttt | UGGUCAGA | m7b | Created | HPRO6_50894_G60310.1_34877888 |
hsa-miR-6845-5p | ctttcTGGCCCCttt | CGGGGCCA | m7b | Disrupted | HPRO6_50894_G60310.1_34877888 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33504305A>T | COSM4928655 | TCGA-DD-A1EB-01 | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-338-3p | gatgtggATGCTGGa | UCCAGCAU | m7b | Disrupted | HPRO6_50893_G60309.1_34876607 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33504299G>A | COSM1163293 | PA285 | [pancreas][NS][carcinoma][ductal_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-198 | gatgCTGGACagatt | GGUCCAGA | m6b | Disrupted | HPRO6_50893_G60309.1_34876607 |
hsa-miR-26b-3p | gatgctGAACAGatt | CCUGUUCU | m6b | Created | HPRO6_50893_G60309.1_34876607 |
hsa-miR-338-3p | gATGCTGGAcagatt | UCCAGCAU | m8a | (m8a->m7a) | HPRO6_50893_G60309.1_34876607 |
hsa-miR-4530 | gaTGCTGGacagatt | CCCAGCAG | m6b | Disrupted | HPRO6_50893_G60309.1_34876607 |
hsa-miR-7157-5p | gATGCTGAacagatt | UCAGCAUU | m7a | Created | HPRO6_50893_G60309.1_34876607 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr21:g.33504298A>G | COSM1566084 | TCGA-DC-5337-01 | [large_intestine][rectum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-18a-3p | atgctGGGCAGatta | ACUGCCCU | m6b | Created | HPRO6_50893_G60309.1_34876607 |
hsa-miR-198 | atgCTGGACagatta | GGUCCAGA | m6b | Disrupted | HPRO6_50893_G60309.1_34876607 |
hsa-miR-324-3p | atgctGGGCAGatta | ACUGCCCC | m6b | Created | HPRO6_50893_G60309.1_34876607 |
hsa-miR-338-3p | ATGCTGGAcagatta | UCCAGCAU | m8a | Disrupted | HPRO6_50893_G60309.1_34876607 |