SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000819
Gene Symbol: GART
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505677A>G COSM4619510 C70 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505675C>T COSM4482494 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4731-3p taaaaaTTGTGTaga CACACAAG m6b Created HHFCT_97640_cluster-15059_5_23

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505665T>G COSM4402615 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-3p gtaGAATTTGacagt CAAAUUCG m7a Disrupted HHFCT_97640_cluster-15059_5_23
hsa-miR-130a-5p gtagAATGTGAcagt UUCACAUU m7b Created HHFCT_97640_cluster-15059_5_23
hsa-miR-23a-3p gtagAATGTGAcagt AUCACAUU m7b Created HHFCT_97640_cluster-15059_5_23
hsa-miR-23b-3p gtagAATGTGAcagt AUCACAUU m7b Created HHFCT_97640_cluster-15059_5_23
hsa-miR-23c gtagAATGTGAcagt AUCACAUU m7b Created HHFCT_97640_cluster-15059_5_23
hsa-miR-6773-3p gtagaatGTGACAGt ACUGUCAC m7b Created HHFCT_97640_cluster-15059_5_23

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505654A>G COSM1616023 BN41 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-3p caGTGCAATtgacct CAUUGCAC m7b (m7b->m6b) HHFCT_97640_cluster-15059_5_23
hsa-miR-32-5p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHFCT_97640_cluster-15059_5_23
hsa-miR-363-3p caGTGCAATTgacct AAUUGCAC m8a Disrupted HHFCT_97640_cluster-15059_5_23
hsa-miR-367-3p caGTGCAATTgacct AAUUGCAC m8a Disrupted HHFCT_97640_cluster-15059_5_23
hsa-miR-92a-3p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHFCT_97640_cluster-15059_5_23
hsa-miR-92b-3p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHFCT_97640_cluster-15059_5_23

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504451C>T COSM1534291 TCGA-69-7979-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-5p tggaAACTGGAgtca GUCCAGUU m7b Created HHFCT_97639_cluster-15059_4_22
hsa-miR-3925-3p tggaaACTGGAGTca ACUCCAGU m8a Created HHFCT_97639_cluster-15059_4_22
hsa-miR-4328 tggAAACTGGagtca CCAGUUUU m7a Created HHFCT_97639_cluster-15059_4_22
hsa-miR-508-5p tggaaaCTGGAGTca UACUCCAG m7b Created HHFCT_97639_cluster-15059_4_22
hsa-miR-5195-3p tggaAACTGGAgtca AUCCAGUU m7b Created HHFCT_97639_cluster-15059_4_22

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504450G>A COSM4101304 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-1-5p ggAAACCAGagtcac GCUGGUUU m7b (m6b->m7b) HHFCT_97639_cluster-15059_4_22
hsa-miR-29b-2-5p gGAAACCAGagtcac CUGGUUUC m8a (m7a->m8a) HHFCT_97639_cluster-15059_4_22
hsa-miR-4522 ggaaacCAGAGTCAc UGACUCUG m8a Created HHFCT_97639_cluster-15059_4_22
hsa-miR-514a-5p ggaaaCCAGAGTcac UACUCUGG m7b Created HHFCT_97639_cluster-15059_4_22
hsa-miR-6764-3p ggaaACCAGAGtcac UCUCUGGU m7b Created HHFCT_97639_cluster-15059_4_22
hsa-miR-6824-3p ggaaACCAGAGtcac UCUCUGGU m7b Created HHFCT_97639_cluster-15059_4_22

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504447G>A COSM1285121 TARGET-30-PASXNN [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-3p aaccGGAATCacagt GGAUUCCU m6b Created HHFCT_97639_cluster-15059_4_22
hsa-miR-4664-3p aACCGGAAtcacagt CUUCCGGU m7b Created HHFCT_97639_cluster-15059_4_22
hsa-miR-4679 aaccggaATCACAGt UCUGUGAU m7b Created HHFCT_97639_cluster-15059_4_22
hsa-miR-8070 aaccggAATCACAgt AUGUGAUU m7b Created HHFCT_97639_cluster-15059_4_22

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504442A>T COSM1534292 TCGA-44-7661-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p gagtcaCTGTTACtg UGUAACAG m7b Created HHFCT_97639_cluster-15059_4_22
hsa-miR-5190 gaGTCACTGttactg CCAGUGAC m7b (m6b->m7b) HHFCT_97639_cluster-15059_4_22
hsa-miR-802 gagtcacTGTTACTg CAGUAACA m7b Created HHFCT_97639_cluster-15059_4_22

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504204C>T COSM4485622 CSCC-47-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1205 aatatttCCTGCAGc UCUGCAGG m7b Disrupted HHFCT_97638_cluster-15059_3_21
hsa-miR-298 aatattTTCTGCagc AGCAGAAG m6b Created HHFCT_97638_cluster-15059_3_21
hsa-miR-3158-5p aatatttTCTGCAGc CCUGCAGA m7b Created HHFCT_97638_cluster-15059_3_21
hsa-miR-4722-5p aatattTCCTGCagc GGCAGGAG m6b Disrupted HHFCT_97638_cluster-15059_3_21
hsa-miR-873-5p aatatTTCCTGCagc GCAGGAAC m7a Disrupted HHFCT_97638_cluster-15059_3_21

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504196C>T COSM4485698 CSCC-49-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3179 ctgcagCCCTTCagc AGAAGGGG m6b Disrupted HHFCT_97638_cluster-15059_3_21
hsa-miR-4446-3p ctgCAGCCCTtcagc CAGGGCUG m7b Disrupted HHFCT_97638_cluster-15059_3_21
hsa-miR-4709-3p ctgcagCTCTTCAgc UUGAAGAG m7b Created HHFCT_97638_cluster-15059_3_21
hsa-miR-558 ctGCAGCTCttcagc UGAGCUGC m7b (m6b->m7b) HHFCT_97638_cluster-15059_3_21
hsa-miR-6829-5p ctGCAGCCCttcagc UGGGCUGC m7b (m7b->m6b) HHFCT_97638_cluster-15059_3_21
hsa-miR-6864-5p ctgcagCCCTTCAgc UUGAAGGG m7b Disrupted HHFCT_97638_cluster-15059_3_21
hsa-miR-7515 ctgcagCCCTTCagc AGAAGGGA m6b Disrupted HHFCT_97638_cluster-15059_3_21

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504187G>T COSM1413864 TCGA-G4-6304-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p ttcaGCTGGTGgcca UCACCAGC m7b Disrupted HHFCT_97638_cluster-15059_3_21

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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